FFCP PHASE1:Hg19::chr1:207507851..207507864,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:207507851..207507864,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_at_chr1:207507851..207507864,+ | |description=CAGE_peak_at_chr1:207507851..207507864,+ | ||
|id=chr1:207507851..207507864,+ | |id=chr1:207507851..207507864,+ | ||
|ontology_enrichment_celltype=CL:0000860!2.52e-17!45;CL:0000738!4.85e-17!140;CL:0002087!1.05e-16!119;CL:0002057!1.30e-14!42;CL:0000037!3.22e-13!172;CL:0000566!3.22e-13!172;CL:0002031!1.24e-12!124;CL:0002032!2.42e-12!165;CL:0000837!2.42e-12!165;CL:0000988!6.76e-12!182;CL:0000766!1.18e-11!76;CL:0002194!4.93e-10!63;CL:0000576!4.93e-10!63;CL:0000040!4.93e-10!63;CL:0000559!4.93e-10!63;CL:0002009!1.94e-09!65;CL:0000839!1.00e-08!70;CL:0000557!1.79e-08!71;CL:0000763!1.93e-07!112;CL:0000049!1.93e-07!112 | |ontology_enrichment_celltype=CL:0000860!2.52e-17!45;CL:0000738!4.85e-17!140;CL:0002087!1.05e-16!119;CL:0002057!1.30e-14!42;CL:0000037!3.22e-13!172;CL:0000566!3.22e-13!172;CL:0002031!1.24e-12!124;CL:0002032!2.42e-12!165;CL:0000837!2.42e-12!165;CL:0000988!6.76e-12!182;CL:0000766!1.18e-11!76;CL:0002194!4.93e-10!63;CL:0000576!4.93e-10!63;CL:0000040!4.93e-10!63;CL:0000559!4.93e-10!63;CL:0002009!1.94e-09!65;CL:0000839!1.00e-08!70;CL:0000557!1.79e-08!71;CL:0000763!1.93e-07!112;CL:0000049!1.93e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000775;2.99e-21;3!CL:0000226;1.36e-19;3!CL:0000842;1.36e-19;3!CL:0000094;6.03e-14;8!CL:0002393;9.92e-11;6!CL:0002397;9.92e-11;6!CL:0000624;2.70e-10;6!CL:0000081;3.58e-10;11!CL:0002623;2.11e-09;3!CL:0000313;1.14e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.11e-21,3;CL:0000226,1.51e-19,3;CL:0000842,1.51e-19,3;CL:0000094,6.15e-14,8;CL:0000738,1.66e-13,136;CL:0000624,2.50e-10,6;CL:0000037,3.20e-10,168;CL:0000081,3.63e-10,11;CL:0002087,1.18e-09,115;CL:0000988,1.64e-09,177;CL:0002623,2.51e-09,3;CL:0000766,1.88e-07,72;CL:0000313,1.99e-07,1;CL:0002393,2.54e-07,9;CL:0002397,2.54e-07,9;CL:0002032,2.87e-07,161;CL:0000837,2.87e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.84e-08!106;DOID:0050687!6.59e-07!143 | |ontology_enrichment_disease=DOID:305!8.84e-08!106;DOID:0050687!6.59e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:2152;1.14e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.99e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.66e-07!102;UBERON:0003061!3.66e-07!102 | |ontology_enrichment_uberon=UBERON:0002390!3.66e-07!102;UBERON:0003061!3.66e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.14e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.99e-07,1 | |||
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| ||
|short_description=p@chr1:207507851..207507864,+ | |short_description=p@chr1:207507851..207507864,+ | ||
}} | }} |
Latest revision as of 03:07, 28 July 2015
Short description: | p@chr1:207507851..207507864, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:207507851..207507864, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.11e-21 | 3 |
single nucleate cell | 1.51e-19 | 3 |
mononuclear cell | 1.51e-19 | 3 |
granulocyte | 6.15e-14 | 8 |
leukocyte | 1.66e-13 | 136 |
CD4-positive, alpha-beta T cell | 2.50e-10 | 6 |
hematopoietic stem cell | 3.20e-10 | 168 |
blood cell | 3.63e-10 | 11 |
nongranular leukocyte | 1.18e-09 | 115 |
hematopoietic cell | 1.64e-09 | 177 |
acinar cell of salivary gland | 2.51e-09 | 3 |
myeloid leukocyte | 1.88e-07 | 72 |
serous secreting cell | 1.99e-07 | 1 |
intermediate monocyte | 2.54e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.54e-07 | 9 |
hematopoietic oligopotent progenitor cell | 2.87e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.87e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.99e-07 | 1 |