FFCP PHASE1:Hg19::chr1:207507851..207507864,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:207507851..207507864,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr1:207507851..207507864,+ | |description=CAGE_peak_at_chr1:207507851..207507864,+ | ||
|id=chr1:207507851..207507864,+ | |id=chr1:207507851..207507864,+ | ||
|ontology_enrichment_celltype=CL:0000860!2.52e-17!45;CL:0000738!4.85e-17!140;CL:0002087!1.05e-16!119;CL:0002057!1.30e-14!42;CL:0000037!3.22e-13!172;CL:0000566!3.22e-13!172;CL:0002031!1.24e-12!124;CL:0002032!2.42e-12!165;CL:0000837!2.42e-12!165;CL:0000988!6.76e-12!182;CL:0000766!1.18e-11!76;CL:0002194!4.93e-10!63;CL:0000576!4.93e-10!63;CL:0000040!4.93e-10!63;CL:0000559!4.93e-10!63;CL:0002009!1.94e-09!65;CL:0000839!1.00e-08!70;CL:0000557!1.79e-08!71;CL:0000763!1.93e-07!112;CL:0000049!1.93e-07!112 | |ontology_enrichment_celltype=CL:0000860!2.52e-17!45;CL:0000738!4.85e-17!140;CL:0002087!1.05e-16!119;CL:0002057!1.30e-14!42;CL:0000037!3.22e-13!172;CL:0000566!3.22e-13!172;CL:0002031!1.24e-12!124;CL:0002032!2.42e-12!165;CL:0000837!2.42e-12!165;CL:0000988!6.76e-12!182;CL:0000766!1.18e-11!76;CL:0002194!4.93e-10!63;CL:0000576!4.93e-10!63;CL:0000040!4.93e-10!63;CL:0000559!4.93e-10!63;CL:0002009!1.94e-09!65;CL:0000839!1.00e-08!70;CL:0000557!1.79e-08!71;CL:0000763!1.93e-07!112;CL:0000049!1.93e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000775;2.99e-21;3!CL:0000226;1.36e-19;3!CL:0000842;1.36e-19;3!CL:0000094;6.03e-14;8!CL:0002393;9.92e-11;6!CL:0002397;9.92e-11;6!CL:0000624;2.70e-10;6!CL:0000081;3.58e-10;11!CL:0002623;2.11e-09;3!CL:0000313;1.14e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.11e-21,3;CL:0000226,1.51e-19,3;CL:0000842,1.51e-19,3;CL:0000094,6.15e-14,8;CL:0000738,1.66e-13,136;CL:0000624,2.50e-10,6;CL:0000037,3.20e-10,168;CL:0000081,3.63e-10,11;CL:0002087,1.18e-09,115;CL:0000988,1.64e-09,177;CL:0002623,2.51e-09,3;CL:0000766,1.88e-07,72;CL:0000313,1.99e-07,1;CL:0002393,2.54e-07,9;CL:0002397,2.54e-07,9;CL:0002032,2.87e-07,161;CL:0000837,2.87e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.84e-08!106;DOID:0050687!6.59e-07!143 | |ontology_enrichment_disease=DOID:305!8.84e-08!106;DOID:0050687!6.59e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:2152;1.14e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.99e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.66e-07!102;UBERON:0003061!3.66e-07!102 | |ontology_enrichment_uberon=UBERON:0002390!3.66e-07!102;UBERON:0003061!3.66e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.14e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.99e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.157421562627358,0,0,0.309632246632152,0,0,0,0.232401601740905,0.284338464974843,0,2.76997704265939,11.4310335057981,3.47217393145363,0,0,0,0,0,0,0.232429036905685,0.822335776043652,0,0.575384784644301,0.256160706529101,0.236482229888585,0.689491361473237,0.645484683583826,0,0.752969358170419,0,0.224723484445085,0.918251677112708,1.28371610830437,0,0,0.398927315243264,0,2.32167390902867,0.56738522469114,0.622822248995575,0.502497330513487,2.08593167368081,0,0.605399502633369,0.368277635987565,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.673971786878971,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,3.98449078376614,0.587237189370939,0.764546456250458,0,0,0,1.180258620683,3.14408610199332,1.64481199199607,0,0,0,0,0,0.589211814949674,0.221533894583621,0,0.512365278902701,0,0,0,0,1.33457906845854,0.267540828089713,2.09071047609954,0.113309342697566,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,5.27121669744253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.55146986366197,0,0.237270619111097,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646882724578552,2.56686072559497,0,0,0,0,0,37.4503511973591,47.865833472644,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.2942852049117,1.38745825144478,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0.895105873378046,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0.508507300585533,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0.32681539055697,0.697118721393016,0,0,0,0.718061155278177,0.325942115766024,0,0,0,0,0,0.498635045700469,0.225595660617181,0,0.335643173951685,0.189753732724185,0,0.210998064528027,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0.364909578431332,0.782658475728359,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0.293977192243133,0.435296032902013,0,0.171986032471617,1.35458863804719,1.24251839046515,0.739039113478883,0,0,0,0,0,0,0.586654148204409,0,0,0,0.576361668616424,0,0,0.14405479798815,0,1.17847017308398,0.135904206073614,0,0,0,0,0.410716136675979,0,0.859530882839914,0.262887354279314,0.279282401272254,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0.408610218334727,0,0.137539436597234,0,0,0,0,0,0,0,0,0.537862017998534,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.387848869084652,0.13223260174269,0.171086837884329,0,0.106787412567695,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0.303298235083296,0.285465333544967,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0.276516872303462,0.194860308839388,0,0,0.327609848846413,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0.322951291263702,0,0.196295437002051,0.353909170043221,0.366857197043358,0.231051332300676,0.381382095467167,0,0,0,0,0,0.785720083444267,0.327543835020193,0.147856086217045,0,0,0.620060389503552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.889851215136553,0,0,1.68163297988273,0,0,0,0,0,0,0,0,0.828864656652147,1.0243108625637,1.38251932362818,0,0.118332000730565,0.0852134047591577,0,0.9164274741762,0,0,1.00669888618013,0,0,0.647428837187895,0,0,0,0,0.198950775161368,0,0,0.439762066981716,0.452888530700021,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0.286679166302903,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0.829169439458779,0.620597975171371,0,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0.653150243690884,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.628776414746108,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.157421562627358,0,0,0.309632246632152,0,0,0,0.232401601740905,0.284338464974843,0,2.76997704265939,11.4310335057981,3.47217393145363,0,0,0,0,0,0,0.232429036905685,0.822335776043652,0,0.575384784644301,0.256160706529101,0.236482229888585,0.689491361473237,0.645484683583826,0,0.752969358170419,0,0.224723484445085,0.918251677112708,1.28371610830437,0,0,0.398927315243264,0,2.32167390902867,0.56738522469114,0.622822248995575,0.502497330513487,2.08593167368081,0,0.605399502633369,0.368277635987565,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.673971786878971,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,3.98449078376614,0.587237189370939,0.764546456250458,0,0,0,1.180258620683,3.14408610199332,1.64481199199607,0,0,0,0,0,0.589211814949674,0.221533894583621,0,0.512365278902701,0,0,0,0,1.33457906845854,0.267540828089713,2.09071047609954,0.113309342697566,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,5.27121669744253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.55146986366197,0,0.237270619111097,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646882724578552,2.56686072559497,0,0,0,0,0,37.4503511973591,47.865833472644,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.2942852049117,1.38745825144478,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0.895105873378046,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0.508507300585533,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0.32681539055697,0.697118721393016,0,0,0,0.718061155278177,0.325942115766024,0,0,0,0,0,0.498635045700469,0.225595660617181,0,0.335643173951685,0.189753732724185,0,0.210998064528027,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0.364909578431332,0.782658475728359,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0.293977192243133,0.435296032902013,0,0.171986032471617,1.35458863804719,1.24251839046515,0.739039113478883,0,0,0,0,0,0,0.586654148204409,0,0,0,0.576361668616424,0,0,0.14405479798815,0,1.17847017308398,0.135904206073614,0,0,0,0,0.410716136675979,0,0.859530882839914,0.262887354279314,0.279282401272254,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0.408610218334727,0,0.137539436597234,0,0,0,0,0,0,0,0,0.537862017998534,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.387848869084652,0.13223260174269,0.171086837884329,0,0.106787412567695,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0.303298235083296,0.285465333544967,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0.276516872303462,0.194860308839388,0,0,0.327609848846413,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0.322951291263702,0,0.196295437002051,0.353909170043221,0.366857197043358,0.231051332300676,0.381382095467167,0,0,0,0,0,0.785720083444267,0.327543835020193,0.147856086217045,0,0,0.620060389503552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.889851215136553,0,0,1.68163297988273,0,0,0,0,0,0,0,0,0.828864656652147,1.0243108625637,1.38251932362818,0,0.118332000730565,0.0852134047591577,0,0.9164274741762,0,0,1.00669888618013,0,0,0.647428837187895,0,0,0,0,0.198950775161368,0,0,0.439762066981716,0.452888530700021,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0.286679166302903,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0.829169439458779,0.620597975171371,0,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0.653150243690884,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.628776414746108,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr1:207507851..207507864,+ | |short_description=p@chr1:207507851..207507864,+ | ||
}} | }} |
Latest revision as of 03:07, 28 July 2015
Short description: | p@chr1:207507851..207507864, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:207507851..207507864, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.11e-21 | 3 |
single nucleate cell | 1.51e-19 | 3 |
mononuclear cell | 1.51e-19 | 3 |
granulocyte | 6.15e-14 | 8 |
leukocyte | 1.66e-13 | 136 |
CD4-positive, alpha-beta T cell | 2.50e-10 | 6 |
hematopoietic stem cell | 3.20e-10 | 168 |
blood cell | 3.63e-10 | 11 |
nongranular leukocyte | 1.18e-09 | 115 |
hematopoietic cell | 1.64e-09 | 177 |
acinar cell of salivary gland | 2.51e-09 | 3 |
myeloid leukocyte | 1.88e-07 | 72 |
serous secreting cell | 1.99e-07 | 1 |
intermediate monocyte | 2.54e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.54e-07 | 9 |
hematopoietic oligopotent progenitor cell | 2.87e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.87e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.99e-07 | 1 |