FFCP PHASE1:Hg19::chr1:207064124..207064133,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:207064124..207064133,- | |||
|description=CAGE_peak_at_chr1:207064124..207064133,- | |description=CAGE_peak_at_chr1:207064124..207064133,- | ||
|id=chr1:207064124..207064133,- | |id=chr1:207064124..207064133,- | ||
|ontology_enrichment_celltype=CL:0000860!1.20e-30!45;CL:0002057!5.98e-30!42;CL:0002194!4.70e-20!63;CL:0000576!4.70e-20!63;CL:0000040!4.70e-20!63;CL:0000559!4.70e-20!63;CL:0002009!2.69e-19!65;CL:0000839!1.37e-17!70;CL:0000557!2.82e-17!71;CL:0000766!7.77e-16!76;CL:0002087!1.72e-09!119;CL:0000763!2.78e-09!112;CL:0000049!2.78e-09!112;CL:0002031!6.40e-09!124;CL:0000738!2.24e-07!140;CL:0000063!6.02e-07!578 | |ontology_enrichment_celltype=CL:0000860!1.20e-30!45;CL:0002057!5.98e-30!42;CL:0002194!4.70e-20!63;CL:0000576!4.70e-20!63;CL:0000040!4.70e-20!63;CL:0000559!4.70e-20!63;CL:0002009!2.69e-19!65;CL:0000839!1.37e-17!70;CL:0000557!2.82e-17!71;CL:0000766!7.77e-16!76;CL:0002087!1.72e-09!119;CL:0000763!2.78e-09!112;CL:0000049!2.78e-09!112;CL:0002031!6.40e-09!124;CL:0000738!2.24e-07!140;CL:0000063!6.02e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.97e-28;33!CL:0002057;7.97e-28;33!CL:0000473;1.64e-22;39!CL:0000234;1.64e-22;39!CL:0000576;3.68e-12;48!CL:0002195;3.18e-11;2!CL:0002571;3.18e-11;2!CL:0000766;1.17e-08;69!CL:0000763;9.96e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;7.97e-28;33!CL:0002057;7.97e-28;33!CL:0000473;1.64e-22;39!CL:0000234;1.64e-22;39!CL:0000576;3.68e-12;48!CL:0002195;3.18e-11;2!CL:0002571;3.18e-11;2!CL:0000766;1.17e-08;69!CL:0000763;9.96e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.67e-23,42;CL:0002057,7.67e-23,42;CL:0000473,5.66e-20,48;CL:0000234,5.66e-20,48;CL:0002194,5.98e-16,59;CL:0000576,5.98e-16,59;CL:0000040,5.98e-16,59;CL:0000559,5.98e-16,59;CL:0002009,1.98e-15,61;CL:0000839,2.90e-14,66;CL:0000557,4.73e-14,67;CL:0000766,4.48e-13,72;CL:0002195,2.47e-11,2;CL:0002571,2.47e-11,2;CL:0000763,1.14e-08,108;CL:0000049,1.14e-08,108;CL:0002087,3.99e-08,115;CL:0002031,8.92e-08,120;CL:0000738,7.95e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.85e-16;42 | |ontology_enrichment_development_v019=CL:0002057;1.85e-16;42 | ||
|ontology_enrichment_disease=DOID:2394!3.75e-13!14;DOID:1749!1.26e-09!14;DOID:120!2.82e-08!27;DOID:193!1.29e-07!29 | |ontology_enrichment_disease=DOID:2394!3.75e-13!14;DOID:1749!1.26e-09!14;DOID:120!2.82e-08!27;DOID:193!1.29e-07!29 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.50e-16!80;UBERON:0001474!4.71e-15!86;UBERON:0002118!2.93e-13!5;UBERON:0004532!2.93e-13!5;UBERON:0002405!1.40e-12!115;UBERON:0004765!4.26e-12!101;UBERON:0001434!4.26e-12!101;UBERON:0002390!6.24e-12!102;UBERON:0003061!6.24e-12!102;UBERON:0002193!1.94e-10!112;UBERON:0000992!1.39e-07!13 | |ontology_enrichment_uberon=UBERON:0002371!1.50e-16!80;UBERON:0001474!4.71e-15!86;UBERON:0002118!2.93e-13!5;UBERON:0004532!2.93e-13!5;UBERON:0002405!1.40e-12!115;UBERON:0004765!4.26e-12!101;UBERON:0001434!4.26e-12!101;UBERON:0002390!6.24e-12!102;UBERON:0003061!6.24e-12!102;UBERON:0002193!1.94e-10!112;UBERON:0000992!1.39e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;5.67e-17;5!UBERON:0000992;4.19e-07;13 | |ontology_enrichment_uberon_v019=UBERON:0002118;5.67e-17;5!UBERON:0000992;4.19e-07;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,6.94e-17,5;UBERON:0002371,2.20e-12,76;UBERON:0001474,1.80e-11,82;UBERON:0004765,1.93e-10,90;UBERON:0002405,4.25e-10,93;UBERON:0002390,1.42e-09,98;UBERON:0003061,1.42e-09,98;UBERON:0001434,2.23e-09,100;UBERON:0002193,1.14e-08,108;UBERON:0000992,4.52e-07,13 | |||
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| ||
|short_description=p@chr1:207064124..207064133,- | |short_description=p@chr1:207064124..207064133,- | ||
}} | }} |
Latest revision as of 02:59, 28 July 2015
Short description: | p@chr1:207064124..207064133, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:207064124..207064133, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.67e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.67e-23 | 42 |
defensive cell | 5.66e-20 | 48 |
phagocyte | 5.66e-20 | 48 |
monopoietic cell | 5.98e-16 | 59 |
monocyte | 5.98e-16 | 59 |
monoblast | 5.98e-16 | 59 |
promonocyte | 5.98e-16 | 59 |
macrophage dendritic cell progenitor | 1.98e-15 | 61 |
myeloid lineage restricted progenitor cell | 2.90e-14 | 66 |
granulocyte monocyte progenitor cell | 4.73e-14 | 67 |
myeloid leukocyte | 4.48e-13 | 72 |
hepatic stem cell | 2.47e-11 | 2 |
hepatic mesenchymal stem cell | 2.47e-11 | 2 |
myeloid cell | 1.14e-08 | 108 |
common myeloid progenitor | 1.14e-08 | 108 |
nongranular leukocyte | 3.99e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 8.92e-08 | 120 |
leukocyte | 7.95e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
right ovary | 6.94e-17 | 5 |
bone marrow | 2.20e-12 | 76 |
bone element | 1.80e-11 | 82 |
skeletal element | 1.93e-10 | 90 |
immune system | 4.25e-10 | 93 |
hematopoietic system | 1.42e-09 | 98 |
blood island | 1.42e-09 | 98 |
skeletal system | 2.23e-09 | 100 |
hemolymphoid system | 1.14e-08 | 108 |
female gonad | 4.52e-07 | 13 |