FFCP PHASE1:Hg19::chr1:205584223..205584233,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:205584223..205584233,-
|short_description=p@chr1:205584223..205584233,-
|description=CAGE_peak_at_chr1:205584223..205584233,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:205584223..205584233,- | |||
|description=CAGE_peak_at_chr1:205584223..205584233,- | |||
|id=chr1:205584223..205584233,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000235;9.51e-09;6!CL:0000313;4.43e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.50e-08,6;CL:0000313,4.33e-07,1;CL:0000819,4.85e-07,1;CL:0000511,6.08e-07,1;CL:0002625,6.08e-07,1;CL:0000216,6.08e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;4.43e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,4.33e-07,1;DOID:0060073,4.85e-07,1;DOID:8675,4.85e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004909;4.75e-12;2!UBERON:0004911;4.43e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004909,2.29e-12,2;UBERON:0004911,4.33e-07,1;UBERON:0001136,6.08e-07,1;UBERON:0001343,6.08e-07,1;UBERON:0004910,6.08e-07,1;UBERON:0005154,6.08e-07,1;UBERON:0005295,6.08e-07,1;UBERON:0004813,6.08e-07,1;UBERON:0005297,6.08e-07,1;UBERON:0005294,6.08e-07,1;UBERON:0010141,6.08e-07,1;UBERON:0005891,6.08e-07,1;UBERON:0000989,7.19e-07,1;UBERON:0008811,7.19e-07,1;UBERON:0006258,7.19e-07,1;UBERON:0005876,7.19e-07,1;UBERON:0004874,7.19e-07,1 | |||
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36984606466 | ||
|short_description=p@chr1:205584223..205584233,- | |||
}} | }} |
Latest revision as of 02:48, 28 July 2015
Short description: | p@chr1:205584223..205584233, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:205584223..205584233, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.50e-08 | 6 |
serous secreting cell | 4.33e-07 | 1 |
B-1 B cell | 4.85e-07 | 1 |
androgen binding protein secreting cell | 6.08e-07 | 1 |
seminiferous tubule epithelial cell | 6.08e-07 | 1 |
Sertoli cell | 6.08e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of gonad | 2.29e-12 | 2 |
epithelium of female gonad | 4.33e-07 | 1 |
mesothelium | 6.08e-07 | 1 |
seminiferous tubule of testis | 6.08e-07 | 1 |
epithelium of male gonad | 6.08e-07 | 1 |
epithelial cord | 6.08e-07 | 1 |
sex cord | 6.08e-07 | 1 |
seminiferous tubule epithelium | 6.08e-07 | 1 |
testis sex cord | 6.08e-07 | 1 |
genital ridge | 6.08e-07 | 1 |
primitive sex cord of indifferent gonad | 6.08e-07 | 1 |
coelomic epithelium | 6.08e-07 | 1 |
penis | 7.19e-07 | 1 |
intromittent organ | 7.19e-07 | 1 |
lateral plate mesenchyme | 7.19e-07 | 1 |
undifferentiated genital tubercle | 7.19e-07 | 1 |
somatopleure | 7.19e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 4.33e-07 | 1 |
lymphatic system cancer | 4.85e-07 | 1 |
lymphosarcoma | 4.85e-07 | 1 |