FFCP PHASE1:Hg19::chr1:205582789..205582793,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:205582789..205582793,- | |||
|description=CAGE_peak_at_chr1:205582789..205582793,- | |description=CAGE_peak_at_chr1:205582789..205582793,- | ||
|id=chr1:205582789..205582793,- | |id=chr1:205582789..205582793,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000313;5.57e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,5.59e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;5.57e-09;1!DOID:630;1.77e-08;1!DOID:0050177;1.77e-08;1!DOID:12603;1.77e-08;1!DOID:0050427;1.77e-08;1!DOID:2513;1.77e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,5.59e-09,1;DOID:12603,1.10e-08,1;DOID:630,1.59e-08,1;DOID:0050177,1.59e-08,1;DOID:0050427,1.59e-08,1;DOID:2513,2.13e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.57e-09;1!UBERON:0002038;1.77e-08;1!UBERON:0009661;1.77e-08;1!UBERON:0002950;1.77e-08;1!UBERON:0001891;1.77e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,5.59e-09,1;UBERON:0002038,4.07e-08,1;UBERON:0009661,4.07e-08,1;UBERON:0002950,4.07e-08,1;UBERON:0001891,4.07e-08,1;UBERON:0009616,4.07e-08,1;UBERON:0010286,4.07e-08,1 | |||
|phase1_expression=0,1.92690471501885,0.281908808191942,0,0,0,0,0,0.522371256399677,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0.273748850145768,0.125542639594803,0.229240217243854,0.246301768349837,0.157421562627358,0,0,0,0,0,0,1.00707360754392,0.853015394924529,0.293600439334847,0,0.200544447470142,0,0,0.647787332037959,0,0.145398238779565,0,0.485168122375632,0,0.411167888021826,0.309706370895104,0,0.512321413058201,0,0.689491361473237,0,0,1.31769637679823,0.545812300115692,0,0,0,0,0,0.199463657621632,0.426224750532694,0.870627715885752,0.56738522469114,0,0,0,0,0,0,0,0,0,0.209658645508376,0.22465726229299,0.150176892841506,0.16072558669708,0.285012743741249,0.19891667719909,0.547992461293902,0,0,0.889509253863555,0.853460445133014,0.400395987036012,0.574752439954483,0.661044872784862,0,0.569212969109448,0,0,0,0.560508562981536,0,0.196709770113833,0.786021525498329,0.205601498999509,0.167186495390678,0,0,0,0.222820913770347,0.294605907474837,0.221533894583621,0.270803863765016,0.384273959177026,0.260118695119756,0.657751618414705,0.276350017785848,0.579606171470105,0,0.267540828089713,0,0.226618685395132,0.766440987203842,0,0.253019692019503,0.637130828648193,0.651083453856419,0,0.301150238155546,0.127986611154418,1.24930726552346,0.473554504088034,0.821127996921047,0,0,0.144824403882799,0,0,0.383587685530591,0,0,0.724232594804119,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.351339142772504,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,1.67360306382335,0.402829317109147,0,0.488124115096339,1.10298924103761,0,0.803697554556718,0,0.225222960966644,0,0,0.366403487860815,0,0,0,0,0.379891534993739,0,0,0.709336764396714,0,0,0.98667019366864,0,0.269421344139376,0.490385709340376,0,0,0,0.936480230490962,0,0.298897361103602,0,0.323745888736263,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.336672227908132,0.500474079487857,0,0,0.30648779579902,0.600952235626387,0.567160915800105,0,0.213557388818567,0.423863802319124,0.300091096084402,0,0,0.37223371266318,0.168776332241266,0.0974370051611986,0,0.552299391853796,0,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0,0.207322110030741,0,0,0,1.92972281457866,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.330881918197182,0,0,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,1.47008711385542,1.26755034821831,0,0,0.441463099414651,0.245976877086227,0,0.439001141634502,0,0.703702806881416,0.555530670951178,0,0,0,0.231860809950154,0,0,0,0.761016608938393,0,0,0.246217006087397,0,0.297262324577456,0.93733833986777,0,0.283550194484773,0.358234090811393,0.290633938513962,0,0.492663237895943,0.528290604079356,0.207328115540772,0.432359860250884,0.12624243342638,0.253991577168676,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0.7333828582095,0.258543431515556,0,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0.479249710983165,0,0,0.289562613335158,0,0.179060963239896,0.336255431980582,0.197030760201927,0.215627574859517,0.256686072559497,0,1.30139853857622,0.773288812777695,0,0,0.749007023947182,2.99161459204025,0,0.613457458595699,0,0.271265023699736,0.207970861530807,0.178428988797162,0.788512075169673,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0.153461973288062,0.561320188866147,0.512556597022804,0.511707249066704,0.482561763430822,0,0.462629081407967,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0.200506470303285,1.19705285616665,0.34444334449382,0.546273504020151,0.524497659837696,0,0.308061348417659,0,0,0.73886140225013,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0.219259876645935,0.261435451024901,0.256450125116389,0,0,0.309123034943167,0.0915694648183434,0.165018999841176,0.574265537996172,0.650060246036521,0,0.386682873168488,0.308097234229289,0.460511024178389,0.275673144969061,0.322260734604821,0,0.0852266274161009,0.356128142586949,0.330569830721956,0.192190067365106,0.127612712494584,0.2023155617111,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0.545999645631943,1.1312434556297,0,0,0.66343897524122,0,0,0,0,0,0,0,0.196498082026242,0,0,1.05553817648832,0.658589785919804,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.443430153536676,0.459446800413919,0,0.764637207142375,0,0.714695326373367,0.822724546172388,0.648473311192717,1.62009431171434,0,0.106824071127473,0,0.490080431962063,1.48642540100575,0.721346064882224,0.355709216742071,1.27541018183058,0.997896857164083,0,0.211673582723883,0,0.561594356226918,0,0,0,0.338583555603207,0.321176150207399,0.403599414382095,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0,0.891547074219827,0.284136146806413,0,0,0,0,0.281338832821026,0.111308705022906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| ||
|short_description=p@chr1:205582789..205582793,- | |short_description=p@chr1:205582789..205582793,- | ||
}} | }} |
Latest revision as of 02:48, 28 July 2015
Short description: | p@chr1:205582789..205582793, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:205582789..205582793, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 5.59e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 5.59e-09 | 1 |
substantia nigra | 4.07e-08 | 1 |
midbrain nucleus | 4.07e-08 | 1 |
regional part of midbrain | 4.07e-08 | 1 |
midbrain | 4.07e-08 | 1 |
presumptive midbrain | 4.07e-08 | 1 |
midbrain neural tube | 4.07e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 5.59e-09 | 1 |
acute leukemia | 1.10e-08 | 1 |
genetic disease | 1.59e-08 | 1 |
monogenic disease | 1.59e-08 | 1 |
xeroderma pigmentosum | 1.59e-08 | 1 |
basal cell carcinoma | 2.13e-08 | 1 |