FFCP PHASE1:Hg19::chr1:205282371..205282375,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:205282371..205282375,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr1:205282371..205282375,- | |description=CAGE_peak_at_chr1:205282371..205282375,- | ||
|id=chr1:205282371..205282375,- | |id=chr1:205282371..205282375,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;3.13e-09;3!CL:0000236;2.39e-07;13!CL:0000094;2.71e-07;8!CL:0000228;5.60e-07;1!CL:0002372;5.60e-07;1!CL:0000313;5.60e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.14e-09,3;CL:0000094,2.93e-07,8;CL:0000228,5.45e-07,1;CL:0002372,5.45e-07,1;CL:0000236,5.90e-07,14;CL:0000313,6.12e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;2.71e-12;2!DOID:1799;2.23e-07;1!DOID:10165;2.23e-07;1!DOID:1798;2.23e-07;1!DOID:2152;5.60e-07;1!DOID:12603;5.60e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.42e-12,2;DOID:1799,1.98e-07,1;DOID:10165,1.98e-07,1;DOID:1798,1.98e-07,1;DOID:2152,6.12e-07,1;DOID:12603,7.29e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,6.12e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0,0,0,0.85870796139317,0.547497700291537,1.50651167513763,0.61130724598361,0.410502947249729,0.0787107813136792,0.393364276848904,0,0,0,0,0.369754010166788,0.46480320348181,0.568676929949686,0,0,0.200544447470142,0.651032612147555,0.223915474239924,0,0,0.872389432677388,1.51150377475524,0.970336244751265,0,0,0,0,0,0,0,0,0,0.752969358170419,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0,0.561643155732475,0.300353785683013,0.16072558669708,0.855038231223746,0.39783335439818,0,0,0.546138611262131,0,0,1.60158394814405,0.574752439954483,1.98313461835459,0,2.84606484554724,2.93618594685469,0.764546456250458,1.32171328579026,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0.25618263945135,0,0.164437904603676,0,0,0,0.267540828089713,0,0,0,0,0,0.95569624297229,0,0,0,0.127986611154418,1.24930726552346,0,0,0,0.267440195783507,0.579297615531196,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.378139268656271,0.665188192387692,0.263504357079378,0.196468613246569,0,0.370784442784429,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0.354668382198357,0,2.1349799145941,0,0,0.269421344139376,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.368502951935304,0.206651562351531,0,0.494533858557114,0,0,0,0.125118519871964,0,0.438977620880838,0,0.45071417671979,0,0.538168907066586,0,0,0,0,0,0,0,0.0974370051611986,0,0.184099797284599,0,0,0.10075209822764,0.339121184620975,0.193260853163297,0.272746120590835,0.286804595389004,0.243947412259191,0.132529768321485,0.464775771478074,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0.100528972411631,0.277765335475589,0,0,1.44331342025273,0.115930404975077,0,0.144366447761074,0.925971025153221,0.761016608938393,0.790204397959275,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0,0,0.197030760201927,1.50939302401662,0.77005821767849,0,0,0,0,0.637938751653163,15.7291475028908,11.966458368161,0.828831026872071,0,0,0,0.415941723061614,0.356857977594324,0.157702415033935,0.468565659970853,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0.431428401637234,0.533637789017222,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0,0.725156697549733,0.200506470303285,0.184161977871793,0.114814448164607,0.364182336013434,0.131124414959424,0.451199612907412,0.231046011313244,0,0,0.316654886678627,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0.650060246036521,0,0,0.770243085573222,0,0.275673144969061,0.322260734604821,0.145016693914229,0.255679882248303,0,0,0,0.382838137483752,0.2023155617111,0,0,0,0,0,0,0,0,0,0.316379424718726,0.953150969619124,0,0,0,0,0.539617372749944,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,2.84823593587081,2.1440859791201,0.411362273086194,0,0.540031437238115,7.13812658664843,0.534120355637366,0,0,1.30062222588003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0.921482106297696,0,0.281338832821026,0.111308705022906,0,0.422250816255987,0.398495976502139,0,0,0.511343412510774,0,0,0.449341755736634,0.895105873378046,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0.552896299656123,0.591095237907095,0,0,0.697118721393016,0.307801034015188,0.113942055847001,1.38338342632836,0.718061155278177,0.760531603454056,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,1.26598838716816,1.95879369790977,0.848118428603645,0,1.99052386215701,0.0884575645033392,0.611030144933625,0,0.247127877893006,0.104421949505455,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0.313932918407225,0,0.569219092059585,0.138674673013139,0.173559738335131,0.391969589657511,0.0870592065804026,0.17472666824203,0.171986032471617,0.483781656445426,0.219267951258557,0.410577285266046,0.290967049465258,0,0.677942222341597,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0.543616824294456,0.209205692624666,0.101998217636322,0.288950589901519,0,0.547621515567972,0,0.859530882839914,0,0,0.229160424011684,0,0,0,0,0,0,0,0.315132729228895,0.247247575143499,0.13480708770837,0.295282444544246,0,0,0.136203406111576,0.160753148465019,0.962776056180637,0.415440338029185,0.2249738915515,0,0,0,0.0788057072991982,0.786818822024972,0,0,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0,0,0.339936274560377,0,0,0,0.26446520348538,0.171086837884329,0,0.427149650270779,0,0,0.992332043623902,0.592834895693833,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0.573409195690071,0.443716206147409,0,0.276697269872462,0.37494122388632,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0.295710299979268,0.159296767163702,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0.385239660814607,0.643324774124777,1.82696004375648,0.453411851024545,0,0.734210113519403,0.179088841081487,0.308801447160972,0.219284049578707,0.176689145945881,0.578742114812744,0.168942440653073,3.33113974164331,1.0362910251936,0.607719912354764,0.276516872303462,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0.172214979660816,0,0,0,0,0.127894371303652,0.323474434190045,0,0,0,0,0.371807292777007,0,0,0,0,0,0.6124909547064,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0,0,0,0.294443155503077,0,0.183428598521679,0.924205329202706,0,0,0,0,0.60511520611056,0,2.88097363929565,0.655087670040387,0,0.0675375846183947,0,0,0,0,0,0,0,0.638812138197976,0.535701835878287,0.336283722218824,0,0,0,0,0.342976018874837,0,0.131545547125698,0.118193840883968,0.111231401892069,0.078493092850514,0.157115589916002,0.560544326627578,0.913158720509496,0,1.43325506366115,0,0.316027223465453,0.464965701472501,0,0,0.207216164163037,0,0.691259661814092,0,0.591660003652827,0.170426809518315,0,0,0,0,1.34226518157351,0,0,0,0,0,0,0,1.98950775161368,0,0,0,0.452888530700021,0.463044948647668,0.874238242015829,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0.0802413666891683,0.730336388246517,0,0.286679166302903,0.315543124386369,0.135982980381829,0,0.5290268405154,0,0.924351257262837,0,0.378499274505237,0,0.760191006068622,0.713921808193872,0,0.918948995348449,0,0,0,0,0.103432995861895,1.27940389140589,0,0.0645889098360061,0.0620747142958579,0.33639558774184,0,2.62752345645685,1.08858373948481,0.684466602170562,0.336760265072938,0.0717222053926763,0,0.0814032686109745,1.06727345877715,0,0,0,0,0.406896178315738,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0,0,0,0.85870796139317,0.547497700291537,1.50651167513763,0.61130724598361,0.410502947249729,0.0787107813136792,0.393364276848904,0,0,0,0,0.369754010166788,0.46480320348181,0.568676929949686,0,0,0.200544447470142,0.651032612147555,0.223915474239924,0,0,0.872389432677388,1.51150377475524,0.970336244751265,0,0,0,0,0,0,0,0,0,0.752969358170419,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0,0.561643155732475,0.300353785683013,0.16072558669708,0.855038231223746,0.39783335439818,0,0,0.546138611262131,0,0,1.60158394814405,0.574752439954483,1.98313461835459,0,2.84606484554724,2.93618594685469,0.764546456250458,1.32171328579026,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0.25618263945135,0,0.164437904603676,0,0,0,0.267540828089713,0,0,0,0,0,0.95569624297229,0,0,0,0.127986611154418,1.24930726552346,0,0,0,0.267440195783507,0.579297615531196,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.378139268656271,0.665188192387692,0.263504357079378,0.196468613246569,0,0.370784442784429,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0.354668382198357,0,2.1349799145941,0,0,0.269421344139376,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.368502951935304,0.206651562351531,0,0.494533858557114,0,0,0,0.125118519871964,0,0.438977620880838,0,0.45071417671979,0,0.538168907066586,0,0,0,0,0,0,0,0.0974370051611986,0,0.184099797284599,0,0,0.10075209822764,0.339121184620975,0.193260853163297,0.272746120590835,0.286804595389004,0.243947412259191,0.132529768321485,0.464775771478074,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0.100528972411631,0.277765335475589,0,0,1.44331342025273,0.115930404975077,0,0.144366447761074,0.925971025153221,0.761016608938393,0.790204397959275,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0,0,0.197030760201927,1.50939302401662,0.77005821767849,0,0,0,0,0.637938751653163,15.7291475028908,11.966458368161,0.828831026872071,0,0,0,0.415941723061614,0.356857977594324,0.157702415033935,0.468565659970853,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0.431428401637234,0.533637789017222,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0,0.725156697549733,0.200506470303285,0.184161977871793,0.114814448164607,0.364182336013434,0.131124414959424,0.451199612907412,0.231046011313244,0,0,0.316654886678627,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0.650060246036521,0,0,0.770243085573222,0,0.275673144969061,0.322260734604821,0.145016693914229,0.255679882248303,0,0,0,0.382838137483752,0.2023155617111,0,0,0,0,0,0,0,0,0,0.316379424718726,0.953150969619124,0,0,0,0,0.539617372749944,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,2.84823593587081,2.1440859791201,0.411362273086194,0,0.540031437238115,7.13812658664843,0.534120355637366,0,0,1.30062222588003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0.921482106297696,0,0.281338832821026,0.111308705022906,0,0.422250816255987,0.398495976502139,0,0,0.511343412510774,0,0,0.449341755736634,0.895105873378046,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0.552896299656123,0.591095237907095,0,0,0.697118721393016,0.307801034015188,0.113942055847001,1.38338342632836,0.718061155278177,0.760531603454056,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,1.26598838716816,1.95879369790977,0.848118428603645,0,1.99052386215701,0.0884575645033392,0.611030144933625,0,0.247127877893006,0.104421949505455,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0.313932918407225,0,0.569219092059585,0.138674673013139,0.173559738335131,0.391969589657511,0.0870592065804026,0.17472666824203,0.171986032471617,0.483781656445426,0.219267951258557,0.410577285266046,0.290967049465258,0,0.677942222341597,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0.543616824294456,0.209205692624666,0.101998217636322,0.288950589901519,0,0.547621515567972,0,0.859530882839914,0,0,0.229160424011684,0,0,0,0,0,0,0,0.315132729228895,0.247247575143499,0.13480708770837,0.295282444544246,0,0,0.136203406111576,0.160753148465019,0.962776056180637,0.415440338029185,0.2249738915515,0,0,0,0.0788057072991982,0.786818822024972,0,0,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0,0,0.339936274560377,0,0,0,0.26446520348538,0.171086837884329,0,0.427149650270779,0,0,0.992332043623902,0.592834895693833,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0.573409195690071,0.443716206147409,0,0.276697269872462,0.37494122388632,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0.295710299979268,0.159296767163702,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0.385239660814607,0.643324774124777,1.82696004375648,0.453411851024545,0,0.734210113519403,0.179088841081487,0.308801447160972,0.219284049578707,0.176689145945881,0.578742114812744,0.168942440653073,3.33113974164331,1.0362910251936,0.607719912354764,0.276516872303462,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0.172214979660816,0,0,0,0,0.127894371303652,0.323474434190045,0,0,0,0,0.371807292777007,0,0,0,0,0,0.6124909547064,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0,0,0,0.294443155503077,0,0.183428598521679,0.924205329202706,0,0,0,0,0.60511520611056,0,2.88097363929565,0.655087670040387,0,0.0675375846183947,0,0,0,0,0,0,0,0.638812138197976,0.535701835878287,0.336283722218824,0,0,0,0,0.342976018874837,0,0.131545547125698,0.118193840883968,0.111231401892069,0.078493092850514,0.157115589916002,0.560544326627578,0.913158720509496,0,1.43325506366115,0,0.316027223465453,0.464965701472501,0,0,0.207216164163037,0,0.691259661814092,0,0.591660003652827,0.170426809518315,0,0,0,0,1.34226518157351,0,0,0,0,0,0,0,1.98950775161368,0,0,0,0.452888530700021,0.463044948647668,0.874238242015829,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0.0802413666891683,0.730336388246517,0,0.286679166302903,0.315543124386369,0.135982980381829,0,0.5290268405154,0,0.924351257262837,0,0.378499274505237,0,0.760191006068622,0.713921808193872,0,0.918948995348449,0,0,0,0,0.103432995861895,1.27940389140589,0,0.0645889098360061,0.0620747142958579,0.33639558774184,0,2.62752345645685,1.08858373948481,0.684466602170562,0.336760265072938,0.0717222053926763,0,0.0814032686109745,1.06727345877715,0,0,0,0,0.406896178315738,0,0.402547587182052,0 | ||
|short_description=p@chr1:205282371..205282375,- | |short_description=p@chr1:205282371..205282375,- | ||
}} | }} |
Latest revision as of 02:45, 28 July 2015
Short description: | p@chr1:205282371..205282375, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:205282371..205282375, - |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.14e-09 | 3 |
granulocyte | 2.93e-07 | 8 |
multinucleate cell | 5.45e-07 | 1 |
myotube | 5.45e-07 | 1 |
B cell | 5.90e-07 | 14 |
serous secreting cell | 6.12e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 6.12e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.42e-12 | 2 |
islet cell tumor | 1.98e-07 | 1 |
endocrine pancreas cancer | 1.98e-07 | 1 |
pancreatic endocrine carcinoma | 1.98e-07 | 1 |
ovary epithelial cancer | 6.12e-07 | 1 |
acute leukemia | 7.29e-07 | 1 |