FFCP PHASE1:Hg19::chr1:204949396..204949409,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:204949396..204949409,+ | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr1:204949396..204949409,+ | |description=CAGE_peak_at_chr1:204949396..204949409,+ | ||
|id=chr1:204949396..204949409,+ | |id=chr1:204949396..204949409,+ | ||
|ontology_enrichment_celltype=CL:0002586!8.00e-18!3;CL:0002580!1.12e-17!3;CL:0000149!1.00e-13!4 | |ontology_enrichment_celltype=CL:0002586!8.00e-18!3;CL:0002580!1.12e-17!3;CL:0000149!1.00e-13!4 | ||
|ontology_enrichment_celltype_v019=CL:0002586;5.96e-34;3!CL:0000149;7.14e-26;4!CL:0000147;2.00e-08;14!CL:0000243;3.38e-07;15!CL:0000125;3.38e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,5.96e-34,3;CL:0000149,7.14e-26,4;CL:0000147,2.00e-08,14;CL:0000243,3.38e-07,15;CL:0000125,3.38e-07,15;CL:0000030,3.38e-07,15;CL:0000339,3.38e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.16e-10;10!CL:0000339;3.38e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;1.22e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.22e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0000966!2.71e-40!5;UBERON:0005388!2.71e-40!5;UBERON:0001802!2.71e-40!5;UBERON:0001781!8.00e-18!3;UBERON:0001782!8.00e-18!3;UBERON:0005424!8.00e-18!3;UBERON:0000019!1.72e-11!19;UBERON:0000047!1.72e-11!19;UBERON:0004088!1.72e-11!19;UBERON:0003072!1.72e-11!19;UBERON:0003071!1.72e-11!19;UBERON:0004128!1.72e-11!19;UBERON:0000970!5.70e-11!20;UBERON:0002104!1.69e-10!21;UBERON:0001456!1.69e-10!21;UBERON:0000020!1.12e-09!23;UBERON:0001032!2.56e-09!24;UBERON:0004456!2.56e-09!24;UBERON:0005085!6.91e-08!29 | |ontology_enrichment_uberon=UBERON:0000966!2.71e-40!5;UBERON:0005388!2.71e-40!5;UBERON:0001802!2.71e-40!5;UBERON:0001781!8.00e-18!3;UBERON:0001782!8.00e-18!3;UBERON:0005424!8.00e-18!3;UBERON:0000019!1.72e-11!19;UBERON:0000047!1.72e-11!19;UBERON:0004088!1.72e-11!19;UBERON:0003072!1.72e-11!19;UBERON:0003071!1.72e-11!19;UBERON:0004128!1.72e-11!19;UBERON:0000970!5.70e-11!20;UBERON:0002104!1.69e-10!21;UBERON:0001456!1.69e-10!21;UBERON:0000020!1.12e-09!23;UBERON:0001032!2.56e-09!24;UBERON:0004456!2.56e-09!24;UBERON:0005085!6.91e-08!29 | ||
|ontology_enrichment_uberon_v019=UBERON:0001781;5.96e-34;3!UBERON:0001782;5.96e-34;3!UBERON:0000966;5.15e-21;5!UBERON:0005388;5.15e-21;5!UBERON:0001802;5.15e-21;5!UBERON:0007625;2.37e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,5.96e-34,3;UBERON:0005424,5.96e-34,3;UBERON:0001781,7.14e-26,4;UBERON:0000966,9.07e-18,6;UBERON:0005388,9.07e-18,6;UBERON:0001802,9.07e-18,6;UBERON:0007625,2.37e-10,11 | |||
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|short_description=p@chr1:204949396..204949409,+ | |short_description=p@chr1:204949396..204949409,+ | ||
}} | }} |
Latest revision as of 02:42, 28 July 2015
Short description: | p@chr1:204949396..204949409, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:204949396..204949409, + |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 5.96e-34 | 3 |
visual pigment cell | 7.14e-26 | 4 |
pigment cell | 2.00e-08 | 14 |
glial cell (sensu Vertebrata) | 3.38e-07 | 15 |
glial cell | 3.38e-07 | 15 |
glioblast | 3.38e-07 | 15 |
glioblast (sensu Vertebrata) | 3.38e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 5.96e-34 | 3 |
presumptive retinal pigmented epithelium | 5.96e-34 | 3 |
layer of retina | 7.14e-26 | 4 |
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
pigment epithelium of eye | 2.37e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.22e-09 | 11 |