FFCP PHASE1:Hg19::chr1:203150041..203150049,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:203150041..203150049,- | |||
|coexpression_cluster_id=C283 | |coexpression_cluster_id=C283 | ||
|description=CAGE_peak_at_chr1:203150041..203150049,- | |description=CAGE_peak_at_chr1:203150041..203150049,- | ||
|id=chr1:203150041..203150049,- | |id=chr1:203150041..203150049,- | ||
|ontology_enrichment_celltype=CL:0000135!1.25e-13!3;CL:0000386!1.25e-13!3;CL:0000388!1.25e-13!3;CL:0000181!1.86e-07!12;CL:0000417!1.86e-07!12;CL:0000668!1.86e-07!12;CL:0000414!1.86e-07!12;CL:0000412!1.86e-07!12;CL:0000182!1.86e-07!12;CL:0000667!3.77e-07!6;CL:0000058!3.77e-07!6;CL:0000138!3.77e-07!6 | |ontology_enrichment_celltype=CL:0000135!1.25e-13!3;CL:0000386!1.25e-13!3;CL:0000388!1.25e-13!3;CL:0000181!1.86e-07!12;CL:0000417!1.86e-07!12;CL:0000668!1.86e-07!12;CL:0000414!1.86e-07!12;CL:0000412!1.86e-07!12;CL:0000182!1.86e-07!12;CL:0000667!3.77e-07!6;CL:0000058!3.77e-07!6;CL:0000138!3.77e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000135;7.79e-88;3!CL:0000388;7.79e-88;3!CL:0000499;1.43e-10;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,9.74e-88,3;CL:0000388,9.74e-88,3;CL:0000499,1.47e-10,28 | |||
|ontology_enrichment_development_v019=UBERON:0005062;9.45e-18;4!UBERON:0007284;9.45e-18;4 | |||
|ontology_enrichment_disease=DOID:5662!1.57e-10!1 | |ontology_enrichment_disease=DOID:5662!1.57e-10!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000043!1.25e-13!3;UBERON:0006331!6.17e-13!3;UBERON:0002134!7.40e-11!1;UBERON:0005208!7.40e-11!1;UBERON:0005946!7.40e-11!1;UBERON:0005965!7.40e-11!1;UBERON:0002078!7.40e-11!1;UBERON:0002298!1.31e-10!8;UBERON:0001282!2.08e-10!1;UBERON:0009842!2.08e-10!1;UBERON:0003704!2.08e-10!1;UBERON:0001171!2.08e-10!1;UBERON:0001172!2.08e-10!1;UBERON:0001874!2.74e-10!1;UBERON:0002038!3.29e-10!1;UBERON:0009661!3.29e-10!1;UBERON:0002308!1.54e-09!9;UBERON:0000125!1.54e-09!9 | |ontology_enrichment_uberon=UBERON:0000043!1.25e-13!3;UBERON:0006331!6.17e-13!3;UBERON:0002134!7.40e-11!1;UBERON:0005208!7.40e-11!1;UBERON:0005946!7.40e-11!1;UBERON:0005965!7.40e-11!1;UBERON:0002078!7.40e-11!1;UBERON:0002298!1.31e-10!8;UBERON:0001282!2.08e-10!1;UBERON:0009842!2.08e-10!1;UBERON:0003704!2.08e-10!1;UBERON:0001171!2.08e-10!1;UBERON:0001172!2.08e-10!1;UBERON:0001874!2.74e-10!1;UBERON:0002038!3.29e-10!1;UBERON:0009661!3.29e-10!1;UBERON:0002308!1.54e-09!9;UBERON:0000125!1.54e-09!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;7.79e-88;3!UBERON:0000043;7.79e-88;3!UBERON:0007845;7.79e-88;3!UBERON:0002134;3.34e-66;1!UBERON:0005208;3.34e-66;1!UBERON:0004145;3.34e-66;1!UBERON:0005946;3.34e-66;1!UBERON:0005965;3.34e-66;1!UBERON:0002078;3.34e-66;1!UBERON:0002081;5.96e-34;2!UBERON:0002133;5.96e-34;2!UBERON:0003978;3.66e-23;3!UBERON:0004151;3.66e-23;3!UBERON:0000946;3.66e-23;3!UBERON:0010313;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,9.74e-88,3;UBERON:0000043,9.74e-88,3;UBERON:0007845,9.74e-88,3;UBERON:0002134,2.39e-66,1;UBERON:0005208,2.39e-66,1;UBERON:0005946,2.39e-66,1;UBERON:0005965,2.39e-66,1;UBERON:0002078,2.39e-66,1;UBERON:0002081,5.04e-34,2;UBERON:0002133,5.04e-34,2;UBERON:0010227,5.04e-34,2;UBERON:0003978,3.27e-23,3;UBERON:0009751,3.27e-23,3;UBERON:0004151,3.27e-23,3;UBERON:0000946,3.27e-23,3;UBERON:0002523,3.27e-23,3;UBERON:0005983,3.27e-23,3;UBERON:0004145,3.27e-23,3;UBERON:0002165,3.27e-23,3;UBERON:0002062,3.27e-23,3;UBERON:0007280,3.27e-23,3;UBERON:0004797,8.99e-11,7;UBERON:0010313,6.13e-08,10;UBERON:0002342,6.13e-08,10;UBERON:0005062,6.13e-08,10 | |||
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|short_description=p@chr1:203150041..203150049,- | |short_description=p@chr1:203150041..203150049,- | ||
}} | }} |
Latest revision as of 02:24, 28 July 2015
Short description: | p@chr1:203150041..203150049, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203150041..203150049, - |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 9.74e-88 | 3 |
tendon cell | 9.74e-88 | 3 |
stromal cell | 1.47e-10 | 28 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 9.74e-88 | 3 |
tendon | 9.74e-88 | 3 |
regular connective tissue | 9.74e-88 | 3 |
tricuspid valve | 2.39e-66 | 1 |
right atrium valve | 2.39e-66 | 1 |
outflow tract of atrium | 2.39e-66 | 1 |
outflow part of right atrium | 2.39e-66 | 1 |
right cardiac atrium | 2.39e-66 | 1 |
cardiac atrium | 5.04e-34 | 2 |
atrioventricular valve | 5.04e-34 | 2 |
future cardiac atrium | 5.04e-34 | 2 |
valve | 3.27e-23 | 3 |
cardiac mesenchyme | 3.27e-23 | 3 |
cardiac chamber | 3.27e-23 | 3 |
cardial valve | 3.27e-23 | 3 |
tunica intima | 3.27e-23 | 3 |
heart layer | 3.27e-23 | 3 |
outflow tract | 3.27e-23 | 3 |
endocardium | 3.27e-23 | 3 |
endocardial cushion | 3.27e-23 | 3 |
presumptive endocardium | 3.27e-23 | 3 |
blood vessel layer | 8.99e-11 | 7 |
neural crest-derived structure | 6.13e-08 | 10 |
neural crest | 6.13e-08 | 10 |
neural fold | 6.13e-08 | 10 |