FFCP PHASE1:Hg19::chr1:201453072..201453104,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:201453072..201453104,- | |||
|description=CAGE_peak_at_chr1:201453072..201453104,- | |description=CAGE_peak_at_chr1:201453072..201453104,- | ||
|id=chr1:201453072..201453104,- | |id=chr1:201453072..201453104,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002594;5.10e-08;4!CL:0000346;5.00e-07;3!CL:1000428;5.00e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,3.87e-08,4;CL:0000346,5.30e-07,3;CL:1000428,5.30e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;3.15e-07;3!DOID:0060084;5.00e-07;3!DOID:127;5.00e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,4.69e-07,3;DOID:0060084,9.67e-07,3;DOID:127,9.67e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.48e-14!115;UBERON:0000477!9.19e-13!286;UBERON:0004111!1.93e-11!241;UBERON:0000025!2.70e-11!194;UBERON:0000481!6.47e-09!347;UBERON:0001049!2.55e-08!57;UBERON:0005068!2.55e-08!57;UBERON:0006241!2.55e-08!57;UBERON:0007135!2.55e-08!57;UBERON:0000483!2.87e-08!309;UBERON:0000119!3.36e-08!312;UBERON:0004872!7.35e-08!84;UBERON:0001981!1.33e-07!60;UBERON:0007500!1.33e-07!60;UBERON:0004537!1.33e-07!60;UBERON:0006965!1.33e-07!60;UBERON:0000475!2.01e-07!365;UBERON:0002050!2.21e-07!605;UBERON:0005423!2.21e-07!605;UBERON:0000468!2.92e-07!659;UBERON:0001637!3.63e-07!42;UBERON:0003509!3.63e-07!42;UBERON:0004572!3.63e-07!42;UBERON:0000923!3.65e-07!604;UBERON:0005291!3.65e-07!604;UBERON:0006598!3.65e-07!604;UBERON:0002532!3.65e-07!604;UBERON:0000922!7.01e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;9.45e-09;4!UBERON:0001310;5.10e-08;4!UBERON:0006947;2.93e-07;3!UBERON:0004054;2.93e-07;3!UBERON:0000412;5.00e-07;3!UBERON:0001992;5.00e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.67e-12,114;UBERON:0007500,1.59e-09,59;UBERON:0001981,1.59e-09,59;UBERON:0004537,1.59e-09,59;UBERON:0006965,1.59e-09,59;UBERON:0005904,3.46e-09,4;UBERON:0004872,1.65e-08,83;UBERON:0001637,1.67e-08,42;UBERON:0003509,1.67e-08,42;UBERON:0004572,1.67e-08,42;UBERON:0001310,3.87e-08,4;UBERON:0004111,7.25e-08,240;UBERON:0000055,1.45e-07,68;UBERON:0006947,1.49e-07,3;UBERON:0004054,1.49e-07,3;UBERON:0000025,1.91e-07,192;UBERON:0000412,5.30e-07,3;UBERON:0001992,5.30e-07,3;UBERON:0000923,7.70e-07,560;UBERON:0010316,7.70e-07,560;UBERON:0005291,7.70e-07,560;UBERON:0006598,7.70e-07,560;UBERON:0010317,7.70e-07,560;UBERON:0002532,7.70e-07,560 | |||
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| ||
|short_description=p@chr1:201453072..201453104,- | |short_description=p@chr1:201453072..201453104,- | ||
}} | }} |
Latest revision as of 02:09, 28 July 2015
Short description: | p@chr1:201453072..201453104, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:201453072..201453104, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 3.87e-08 | 4 |
hair follicle dermal papilla cell | 5.30e-07 | 3 |
stem cell of epidermis | 5.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.67e-12 | 114 |
epithelial tube open at both ends | 1.59e-09 | 59 |
blood vessel | 1.59e-09 | 59 |
blood vasculature | 1.59e-09 | 59 |
vascular cord | 1.59e-09 | 59 |
duct of male reproductive system | 3.46e-09 | 4 |
splanchnic layer of lateral plate mesoderm | 1.65e-08 | 83 |
artery | 1.67e-08 | 42 |
arterial blood vessel | 1.67e-08 | 42 |
arterial system | 1.67e-08 | 42 |
umbilical artery | 3.87e-08 | 4 |
anatomical conduit | 7.25e-08 | 240 |
vessel | 1.45e-07 | 68 |
male genital duct | 1.49e-07 | 3 |
internal male genitalia | 1.49e-07 | 3 |
tube | 1.91e-07 | 192 |
dermal papilla | 5.30e-07 | 3 |
papillary layer of dermis | 5.30e-07 | 3 |
germ layer | 7.70e-07 | 560 |
germ layer / neural crest | 7.70e-07 | 560 |
embryonic tissue | 7.70e-07 | 560 |
presumptive structure | 7.70e-07 | 560 |
germ layer / neural crest derived structure | 7.70e-07 | 560 |
epiblast (generic) | 7.70e-07 | 560 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 4.69e-07 | 3 |
cell type benign neoplasm | 9.67e-07 | 3 |
leiomyoma | 9.67e-07 | 3 |