FFCP PHASE1:Hg19::chr1:201337320..201337325,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:201337320..201337325,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr1:201337320..201337325,+ | |description=CAGE_peak_at_chr1:201337320..201337325,+ | ||
|id=chr1:201337320..201337325,+ | |id=chr1:201337320..201337325,+ | ||
|ontology_enrichment_celltype=CL:0002575!1.36e-07!2;CL:0002097!1.87e-07!2;CL:1000415!1.99e-07!2 | |ontology_enrichment_celltype=CL:0002575!1.36e-07!2;CL:0002097!1.87e-07!2;CL:1000415!1.99e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002575;2.55e-15;2!CL:0000669;2.52e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,2.74e-15,2;CL:0000669,2.61e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.15e-29;1!UBERON:0010226;1.15e-29;1!UBERON:0005062;5.61e-29;4!UBERON:0007284;5.61e-29;4 | |||
|ontology_enrichment_disease=DOID:114!1.67e-26!2;DOID:178!4.53e-14!1;DOID:326!4.53e-14!1;DOID:3978!4.53e-14!1;DOID:3394!4.53e-14!1;DOID:5844!4.53e-14!1;DOID:1287!9.15e-14!4 | |||
|ontology_enrichment_disease_v019=DOID:114;2.33e-57;2!DOID:178;2.05e-29;1!DOID:326;2.05e-29;1!DOID:3978;2.05e-29;1!DOID:3394;2.05e-29;1!DOID:5844;2.05e-29;1!DOID:1287;2.55e-29;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.02e-57,2;DOID:178,1.78e-29,1;DOID:326,1.78e-29,1;DOID:3978,1.78e-29,1;DOID:3394,1.78e-29,1;DOID:5844,1.78e-29,1;DOID:1287,2.37e-29,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!4.29e-29!27;UBERON:0004151!5.05e-18!3;UBERON:0003978!8.40e-18!3;UBERON:0009751!8.40e-18!3;UBERON:0000946!8.40e-18!3;UBERON:0002523!8.40e-18!3;UBERON:0005983!8.40e-18!3;UBERON:0002165!8.40e-18!3;UBERON:0002062!8.40e-18!3;UBERON:0007280!8.40e-18!3;UBERON:0002079!3.50e-14!1;UBERON:0002084!3.98e-14!1;UBERON:0002082!3.98e-14!1;UBERON:0004706!3.98e-14!1;UBERON:0002146!5.15e-14!1;UBERON:0005623!5.15e-14!1;UBERON:0002135!5.85e-14!1;UBERON:0000948!3.97e-13!24;UBERON:0005498!3.97e-13!24;UBERON:0004140!3.97e-13!24;UBERON:0009881!3.97e-13!24;UBERON:0004141!3.97e-13!24;UBERON:0003084!3.97e-13!24;UBERON:0007005!3.97e-13!24;UBERON:0004139!3.97e-13!24;UBERON:0004291!3.97e-13!24;UBERON:0003103!6.44e-11!69;UBERON:0002342!1.24e-08!14;UBERON:0005062!1.24e-08!14;UBERON:0002081!9.87e-08!2;UBERON:0002133!1.28e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;8.53e-41;25!UBERON:0004151;1.01e-38;3!UBERON:0003978;3.19e-38;3!UBERON:0000946;3.19e-38;3!UBERON:0002084;1.15e-29;1!UBERON:0002079;1.15e-29;1!UBERON:0002082;1.15e-29;1!UBERON:0002146;2.05e-29;1!UBERON:0005623;2.05e-29;1!UBERON:0002135;3.64e-29;1!UBERON:0000948;4.86e-21;22!UBERON:0002081;1.43e-15;2!UBERON:0002133;2.55e-15;2!UBERON:0010313;2.98e-12;10!UBERON:0003103;7.06e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.01e-38,3;UBERON:0003978,3.19e-38,3;UBERON:0009751,3.19e-38,3;UBERON:0000946,3.19e-38,3;UBERON:0002523,3.19e-38,3;UBERON:0005983,3.19e-38,3;UBERON:0002165,3.19e-38,3;UBERON:0002062,3.19e-38,3;UBERON:0007280,3.19e-38,3;UBERON:0007100,7.95e-38,27;UBERON:0002079,9.99e-30,1;UBERON:0002084,1.33e-29,1;UBERON:0002082,1.33e-29,1;UBERON:0010226,1.33e-29,1;UBERON:0002146,2.37e-29,1;UBERON:0005623,2.37e-29,1;UBERON:0002135,3.16e-29,1;UBERON:0000948,2.44e-19,24;UBERON:0005498,2.44e-19,24;UBERON:0004140,2.44e-19,24;UBERON:0009881,2.44e-19,24;UBERON:0004141,2.44e-19,24;UBERON:0003084,2.44e-19,24;UBERON:0007005,2.44e-19,24;UBERON:0004139,2.44e-19,24;UBERON:0004291,2.44e-19,24;UBERON:0004797,4.73e-17,7;UBERON:0002081,1.33e-15,2;UBERON:0010227,1.33e-15,2;UBERON:0002133,2.37e-15,2;UBERON:0003103,2.96e-15,68;UBERON:0010313,2.98e-12,10;UBERON:0002342,2.98e-12,10;UBERON:0005062,2.98e-12,10;UBERON:0001009,2.37e-09,112;UBERON:0007023,3.44e-09,114 | |||
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|short_description=p@chr1:201337320..201337325,+ | |short_description=p@chr1:201337320..201337325,+ | ||
}} | }} |
Latest revision as of 02:07, 28 July 2015
Short description: | p@chr1:201337320..201337325, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:201337320..201337325, + |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 2.74e-15 | 2 |
pericyte cell | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.01e-38 | 3 |
valve | 3.19e-38 | 3 |
cardiac mesenchyme | 3.19e-38 | 3 |
cardial valve | 3.19e-38 | 3 |
tunica intima | 3.19e-38 | 3 |
heart layer | 3.19e-38 | 3 |
endocardium | 3.19e-38 | 3 |
endocardial cushion | 3.19e-38 | 3 |
presumptive endocardium | 3.19e-38 | 3 |
primary circulatory organ | 7.95e-38 | 27 |
left cardiac atrium | 9.99e-30 | 1 |
heart left ventricle | 1.33e-29 | 1 |
cardiac ventricle | 1.33e-29 | 1 |
future cardiac ventricle | 1.33e-29 | 1 |
pulmonary valve | 2.37e-29 | 1 |
semi-lunar valve | 2.37e-29 | 1 |
mitral valve | 3.16e-29 | 1 |
heart | 2.44e-19 | 24 |
primitive heart tube | 2.44e-19 | 24 |
primary heart field | 2.44e-19 | 24 |
anterior lateral plate mesoderm | 2.44e-19 | 24 |
heart tube | 2.44e-19 | 24 |
heart primordium | 2.44e-19 | 24 |
cardiac mesoderm | 2.44e-19 | 24 |
cardiogenic plate | 2.44e-19 | 24 |
heart rudiment | 2.44e-19 | 24 |
blood vessel layer | 4.73e-17 | 7 |
cardiac atrium | 1.33e-15 | 2 |
future cardiac atrium | 1.33e-15 | 2 |
atrioventricular valve | 2.37e-15 | 2 |
compound organ | 2.96e-15 | 68 |
neural crest-derived structure | 2.98e-12 | 10 |
neural crest | 2.98e-12 | 10 |
neural fold | 2.98e-12 | 10 |
circulatory system | 2.37e-09 | 112 |
adult organism | 3.44e-09 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.02e-57 | 2 |
vascular disease | 1.78e-29 | 1 |
ischemia | 1.78e-29 | 1 |
extrinsic cardiomyopathy | 1.78e-29 | 1 |
myocardial ischemia | 1.78e-29 | 1 |
myocardial infarction | 1.78e-29 | 1 |
cardiovascular system disease | 2.37e-29 | 4 |