FFCP PHASE1:Hg19::chr1:201337311..201337318,+: Difference between revisions
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|id=chr1:201337311..201337318,+
|short_description=p@chr1:201337311..201337318,+
|description=CAGE_peak_at_chr1:201337311..201337318,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:201337311..201337318,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr1:201337311..201337318,+ | |||
|id=chr1:201337311..201337318,+ | |||
|ontology_enrichment_celltype=CL:0000188!3.69e-14!9;CL:0000594!3.17e-11!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.88e-21;1!UBERON:0010226;2.30e-21;1!UBERON:0000358;7.72e-21;1!UBERON:0004140;7.72e-21;1!UBERON:0005062;9.45e-21;4!UBERON:0007284;9.45e-21;4!UBERON:0006603;1.92e-07;65 | |||
|ontology_enrichment_disease=DOID:114!9.07e-18!2;DOID:178!1.12e-09!1;DOID:326!1.12e-09!1;DOID:3978!1.12e-09!1;DOID:3394!1.12e-09!1;DOID:5844!1.12e-09!1;DOID:1287!2.45e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:114;7.33e-41;2!DOID:178;3.45e-21;1!DOID:326;3.45e-21;1!DOID:3978;3.45e-21;1!DOID:3394;3.45e-21;1!DOID:5844;3.45e-21;1!DOID:1287;5.17e-21;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.33e-41,2;DOID:178,3.45e-21,1;DOID:326,3.45e-21,1;DOID:3978,3.45e-21,1;DOID:3394,3.45e-21,1;DOID:5844,3.45e-21,1;DOID:1287,5.17e-21,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!7.60e-29!27;UBERON:0004151!1.71e-25!3;UBERON:0003978!2.80e-25!3;UBERON:0009751!2.80e-25!3;UBERON:0000946!2.80e-25!3;UBERON:0002523!2.80e-25!3;UBERON:0005983!2.80e-25!3;UBERON:0002165!2.80e-25!3;UBERON:0002062!2.80e-25!3;UBERON:0007280!2.80e-25!3;UBERON:0003103!1.23e-17!69;UBERON:0002081!1.62e-17!2;UBERON:0002133!2.44e-17!2;UBERON:0000948!5.66e-16!24;UBERON:0005498!5.66e-16!24;UBERON:0004140!5.66e-16!24;UBERON:0009881!5.66e-16!24;UBERON:0004141!5.66e-16!24;UBERON:0003084!5.66e-16!24;UBERON:0007005!5.66e-16!24;UBERON:0004139!5.66e-16!24;UBERON:0004291!5.66e-16!24;UBERON:0002079!8.68e-10!1;UBERON:0002084!9.44e-10!1;UBERON:0002082!9.44e-10!1;UBERON:0004706!9.44e-10!1;UBERON:0002146!1.03e-09!1;UBERON:0005623!1.03e-09!1;UBERON:0002135!1.32e-09!1;UBERON:0002134!1.84e-09!1;UBERON:0005208!1.84e-09!1;UBERON:0005946!1.84e-09!1;UBERON:0005965!1.84e-09!1;UBERON:0002078!1.84e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.66e-50;25!UBERON:0004151;1.06e-27;3!UBERON:0003978;2.72e-27;3!UBERON:0000946;2.72e-27;3!UBERON:0000948;1.15e-22;22!UBERON:0002079;1.88e-21;1!UBERON:0002084;2.30e-21;1!UBERON:0002082;2.30e-21;1!UBERON:0002146;3.45e-21;1!UBERON:0005623;3.45e-21;1!UBERON:0002135;5.16e-21;1!UBERON:0002081;2.02e-11;2!UBERON:0002133;3.35e-11;2!UBERON:0003103;4.72e-10;61!UBERON:0010313;6.80e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.34e-46,27;UBERON:0004151,1.06e-27,3;UBERON:0003978,2.38e-27,3;UBERON:0009751,2.38e-27,3;UBERON:0000946,2.38e-27,3;UBERON:0002523,2.38e-27,3;UBERON:0005983,2.38e-27,3;UBERON:0002165,2.38e-27,3;UBERON:0002062,2.38e-27,3;UBERON:0007280,2.38e-27,3;UBERON:0002079,1.88e-21,1;UBERON:0002084,2.30e-21,1;UBERON:0002082,2.30e-21,1;UBERON:0010226,2.30e-21,1;UBERON:0002146,2.82e-21,1;UBERON:0005623,2.82e-21,1;UBERON:0002135,5.16e-21,1;UBERON:0000948,7.78e-21,24;UBERON:0005498,7.78e-21,24;UBERON:0004140,7.78e-21,24;UBERON:0009881,7.78e-21,24;UBERON:0004141,7.78e-21,24;UBERON:0003084,7.78e-21,24;UBERON:0007005,7.78e-21,24;UBERON:0004139,7.78e-21,24;UBERON:0004291,7.78e-21,24;UBERON:0003103,2.12e-18,68;UBERON:0004797,2.51e-12,7;UBERON:0002081,2.02e-11,2;UBERON:0010227,2.02e-11,2;UBERON:0002133,3.35e-11,2;UBERON:0001009,4.83e-11,112;UBERON:0010313,6.54e-09,10;UBERON:0002342,6.54e-09,10;UBERON:0005062,6.54e-09,10;UBERON:0007023,2.43e-08,114 | |||
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|short_description=p@chr1:201337311..201337318,+ | |||
}} | }} |
Latest revision as of 02:07, 28 July 2015
Short description: | p@chr1:201337311..201337318, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:201337311..201337318, + |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.34e-46 | 27 |
cardiac chamber | 1.06e-27 | 3 |
valve | 2.38e-27 | 3 |
cardiac mesenchyme | 2.38e-27 | 3 |
cardial valve | 2.38e-27 | 3 |
tunica intima | 2.38e-27 | 3 |
heart layer | 2.38e-27 | 3 |
endocardium | 2.38e-27 | 3 |
endocardial cushion | 2.38e-27 | 3 |
presumptive endocardium | 2.38e-27 | 3 |
left cardiac atrium | 1.88e-21 | 1 |
heart left ventricle | 2.30e-21 | 1 |
cardiac ventricle | 2.30e-21 | 1 |
future cardiac ventricle | 2.30e-21 | 1 |
pulmonary valve | 2.82e-21 | 1 |
semi-lunar valve | 2.82e-21 | 1 |
mitral valve | 5.16e-21 | 1 |
heart | 7.78e-21 | 24 |
primitive heart tube | 7.78e-21 | 24 |
primary heart field | 7.78e-21 | 24 |
anterior lateral plate mesoderm | 7.78e-21 | 24 |
heart tube | 7.78e-21 | 24 |
heart primordium | 7.78e-21 | 24 |
cardiac mesoderm | 7.78e-21 | 24 |
cardiogenic plate | 7.78e-21 | 24 |
heart rudiment | 7.78e-21 | 24 |
compound organ | 2.12e-18 | 68 |
blood vessel layer | 2.51e-12 | 7 |
cardiac atrium | 2.02e-11 | 2 |
future cardiac atrium | 2.02e-11 | 2 |
atrioventricular valve | 3.35e-11 | 2 |
circulatory system | 4.83e-11 | 112 |
neural crest-derived structure | 6.54e-09 | 10 |
neural crest | 6.54e-09 | 10 |
neural fold | 6.54e-09 | 10 |
adult organism | 2.43e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.33e-41 | 2 |
vascular disease | 3.45e-21 | 1 |
ischemia | 3.45e-21 | 1 |
extrinsic cardiomyopathy | 3.45e-21 | 1 |
myocardial ischemia | 3.45e-21 | 1 |
myocardial infarction | 3.45e-21 | 1 |
cardiovascular system disease | 5.17e-21 | 4 |