FFCP PHASE1:Hg19::chr1:201334364..201334418,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=7139 | |EntrezGene=entrezgene:7139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=11949 | |HGNC=HGNC:11949 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000479297_5end | |association_with_transcript=-10bp_to_ENST00000479297_5end | ||
|cluster_id=chr1:201334364..201334418,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_4_at_TNNT2_5end | |description=CAGE_peak_4_at_TNNT2_5end |
Revision as of 02:07, 28 July 2015
Short description: | p4@TNNT2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNNT2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -10bp_to_ENST00000479297_5end |
EntrezGene: | 7139 |
HGNC: | 11949 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@TNNT2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.64e-36 | 3 |
valve | 3.36e-36 | 3 |
cardiac mesenchyme | 3.36e-36 | 3 |
cardial valve | 3.36e-36 | 3 |
tunica intima | 3.36e-36 | 3 |
heart layer | 3.36e-36 | 3 |
endocardium | 3.36e-36 | 3 |
endocardial cushion | 3.36e-36 | 3 |
presumptive endocardium | 3.36e-36 | 3 |
primary circulatory organ | 1.33e-34 | 27 |
Showing 1 to 10 of 41 entries
Ontology term | p-value | n |
---|---|---|
heart disease | 8.00e-25 | 2 |
vascular disease | 3.76e-13 | 1 |
ischemia | 3.76e-13 | 1 |
extrinsic cardiomyopathy | 3.76e-13 | 1 |
myocardial ischemia | 3.76e-13 | 1 |
myocardial infarction | 3.76e-13 | 1 |
cardiovascular system disease | 6.44e-13 | 4 |
Showing 1 to 7 of 7 entries