FFCP PHASE1:Hg19::chr1:200452599..200452614,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:200452599..200452614,- | |||
|coexpression_cluster_id=C1842 | |||
|description=CAGE_peak_at_chr1:200452599..200452614,- | |||
|id=chr1:200452599..200452614,- | |||
|ontology_enrichment_celltype=CL:0002334!2.23e-21!12;CL:0000057!1.06e-14!75;CL:0000055!3.27e-13!180;CL:0002620!4.29e-10!23;CL:0002580!5.58e-10!3;CL:0002579!1.64e-09!3;CL:0002573!2.21e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.16e-29;3!CL:0002334;5.94e-20;12!CL:0002579;1.12e-13;3!CL:0002620;7.25e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,6.80e-30,3;CL:0002334,6.19e-20,12;CL:0002579,1.70e-13,3;CL:0000057,4.52e-11,76;CL:0002620,7.78e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!6.66e-09!5;DOID:450!6.66e-09!5;DOID:66!6.66e-09!5;DOID:423!6.66e-09!5;DOID:0080000!6.66e-09!5;DOID:11722!6.66e-09!5;DOID:3350!7.68e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1192;1.93e-13;3!DOID:6193;3.24e-11;1!DOID:3369;1.05e-10;1!DOID:4235;1.05e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,1.41e-13,3;DOID:6193,3.08e-11,1;DOID:4235,6.77e-11,1;DOID:3369,9.05e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000310!3.85e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;4.57e-11;1!UBERON:0004457;4.74e-10;9!UBERON:0000042;4.74e-10;9!UBERON:0000310;2.61e-09;10!UBERON:0001443;1.65e-08;11!UBERON:0003688;2.82e-07;6!UBERON:0002358;2.82e-07;6!UBERON:0003684;2.82e-07;6!UBERON:0001178;2.82e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,4.58e-11,1;UBERON:0000310,2.23e-09,10;UBERON:0001443,1.44e-08,11;UBERON:0004457,1.46e-07,12;UBERON:0000042,1.46e-07,12;UBERON:0003688,3.46e-07,6;UBERON:0002358,3.46e-07,6;UBERON:0003684,3.46e-07,6;UBERON:0001178,3.46e-07,6 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,2.33125091275518,0.600182192168805,0.103052529238439,0.257640540045629,0,1.35021065793013,4.18979122193154,1.00973509697646,0.460249493211497,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0.737476674166813,0,0,0,0,0,0,0,0,0,3.2254015016441,4.45039722535381,1.96462066103151,0.768834895534206,1.02341449813341,2.0911009748669,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0.178064071293475,0,0,0,0,0.929691098594572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05553817648832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26773461696071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,2.10341978862502,0,0.189403005275089,0.754703705257725,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0.464033759878494,0,0,0.686791410365586,1.34699795506368,0,0.385239660814607,0,0,2.493765180635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,1.1441462864015,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,1.51149313853035,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:200452599..200452614,- | |||
}} |
Latest revision as of 02:01, 28 July 2015
Short description: | p@chr1:200452599..200452614, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:200452599..200452614, - |
Coexpression cluster: | C1842_Preadipocyte_epithelioid_Synoviocyte_tenocyte_renal_Fibroblast_spindle |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 6.80e-30 | 3 |
preadipocyte | 6.19e-20 | 12 |
omentum preadipocyte | 1.70e-13 | 3 |
fibroblast | 4.52e-11 | 76 |
skin fibroblast | 7.78e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 4.58e-11 | 1 |
breast | 2.23e-09 | 10 |
chest | 1.44e-08 | 11 |
cavity lining | 1.46e-07 | 12 |
serous membrane | 1.46e-07 | 12 |
omentum | 3.46e-07 | 6 |
peritoneum | 3.46e-07 | 6 |
abdominal cavity | 3.46e-07 | 6 |
visceral peritoneum | 3.46e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 1.41e-13 | 3 |
epithelioid sarcoma | 3.08e-11 | 1 |
spindle cell sarcoma | 6.77e-11 | 1 |
peripheral primitive neuroectodermal tumor | 9.05e-11 | 1 |