FFCP PHASE1:Hg19::chr1:198203826..198203841,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:198203826..198203841,+ | |||
|description=CAGE_peak_at_chr1:198203826..198203841,+ | |description=CAGE_peak_at_chr1:198203826..198203841,+ | ||
|id=chr1:198203826..198203841,+ | |id=chr1:198203826..198203841,+ | ||
|ontology_enrichment_celltype=CL:0002593;1.21e-24;2!CL:0000077;2.73e-15;19!CL:0000511;6.42e-13;1!CL:0002625;6.42e-13;1!CL:0002557;6.42e-13;1!CL:0000216;6.42e-13;1!CL:0002595;1.90e-10;5!CL:0002545;4.29e-07;2 | |ontology_enrichment_celltype=CL:0000077!1.30e-15!19;CL:0000222!1.70e-09!119;CL:0000213!7.49e-07!57;CL:0000215!7.49e-07!57 | ||
| | |ontology_enrichment_celltype_v019=CL:0002593;1.21e-24;2!CL:0000077;2.73e-15;19!CL:0000511;6.42e-13;1!CL:0002625;6.42e-13;1!CL:0002557;6.42e-13;1!CL:0000216;6.42e-13;1!CL:0002595;1.90e-10;5!CL:0002545;4.29e-07;2 | ||
|ontology_enrichment_disease=DOID:0060084;5.40e-36;3!DOID:127;5.40e-36;3!DOID:0060072;3.45e-27;4 | |ontology_enrichment_celltype_v019_2=CL:0002593,2.08e-24,2;CL:0000077,2.17e-15,19;CL:0000511,4.23e-13,1;CL:0002625,4.23e-13,1;CL:0000216,4.23e-13,1;CL:0002557,8.64e-13,1;CL:0002595,2.35e-10,5;CL:0002545,5.28e-07,2;CL:0000213,6.82e-07,58;CL:0000215,6.82e-07,58;CL:0000222,9.45e-07,121 | ||
|ontology_enrichment_uberon=UBERON:0002456;1.21e-24;2!UBERON:0001136;6.42e-13;1!UBERON:0001343;6.42e-13;1!UBERON:0004910;6.42e-13;1!UBERON:0004813;6.42e-13;1!UBERON:0003834;1.90e-10;5!UBERON:0001533;1.90e-10;5!UBERON:0004573;1.62e-08;33!UBERON:0004571;1.62e-08;33!UBERON:0001637;4.45e-08;42!UBERON:0003509;4.45e-08;42!UBERON:0004572;4.45e-08;42!UBERON:0003513;1.04e-07;7!UBERON:0005800;4.29e-07;2!UBERON:0000078;4.29e-07;2!UBERON:0004909;4.29e-07;2!UBERON:0001515;4.29e-07;2!UBERON:0002012;4.29e-07;2!UBERON:0008886;4.29e-07;2!UBERON:0000995;7.85e-07;17 | |ontology_enrichment_development_v019=UBERON:0005795;2.94e-11;10 | ||
|ontology_enrichment_disease=DOID:0060072!6.79e-08!4;DOID:0060084!7.89e-07!3;DOID:127!7.89e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.40e-36;3!DOID:127;5.40e-36;3!DOID:0060072;3.45e-27;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.98e-36,3;DOID:127,2.98e-36,3;DOID:0060072,2.21e-27,4 | |||
|ontology_enrichment_uberon=UBERON:0001637!8.07e-09!42;UBERON:0003509!8.07e-09!42;UBERON:0004572!8.07e-09!42;UBERON:0004872!5.06e-08!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.21e-24;2!UBERON:0001136;6.42e-13;1!UBERON:0001343;6.42e-13;1!UBERON:0004910;6.42e-13;1!UBERON:0004813;6.42e-13;1!UBERON:0003834;1.90e-10;5!UBERON:0001533;1.90e-10;5!UBERON:0004573;1.62e-08;33!UBERON:0004571;1.62e-08;33!UBERON:0001637;4.45e-08;42!UBERON:0003509;4.45e-08;42!UBERON:0004572;4.45e-08;42!UBERON:0003513;1.04e-07;7!UBERON:0005800;4.29e-07;2!UBERON:0000078;4.29e-07;2!UBERON:0004909;4.29e-07;2!UBERON:0001515;4.29e-07;2!UBERON:0002012;4.29e-07;2!UBERON:0008886;4.29e-07;2!UBERON:0000995;7.85e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,2.08e-24,2;UBERON:0001136,4.23e-13,1;UBERON:0001343,4.23e-13,1;UBERON:0004910,4.23e-13,1;UBERON:0005154,4.23e-13,1;UBERON:0005295,4.23e-13,1;UBERON:0004813,4.23e-13,1;UBERON:0005297,4.23e-13,1;UBERON:0005294,4.23e-13,1;UBERON:0010141,4.23e-13,1;UBERON:0005891,4.23e-13,1;UBERON:0003834,2.35e-10,5;UBERON:0001533,2.35e-10,5;UBERON:0001637,1.30e-09,42;UBERON:0003509,1.30e-09,42;UBERON:0004572,1.30e-09,42;UBERON:0004573,9.12e-09,33;UBERON:0004571,9.12e-09,33;UBERON:0004872,4.18e-08,83;UBERON:0003513,1.21e-07,7;UBERON:0004909,3.48e-07,2;UBERON:0000078,4.98e-07,2;UBERON:0007497,4.98e-07,2;UBERON:0003643,4.98e-07,2;UBERON:0003504,4.98e-07,2;UBERON:0003469,4.98e-07,2;UBERON:0003496,4.98e-07,2;UBERON:0002012,4.98e-07,2;UBERON:0008886,4.98e-07,2;UBERON:0007303,4.98e-07,2;UBERON:0002061,4.98e-07,2;UBERON:0005432,4.98e-07,2;UBERON:0004363,4.98e-07,2;UBERON:0005800,5.28e-07,2;UBERON:0001515,5.28e-07,2;UBERON:0007500,9.90e-07,59;UBERON:0001981,9.90e-07,59;UBERON:0004537,9.90e-07,59;UBERON:0006965,9.90e-07,59 | |||
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| ||
|short_description=p@chr1:198203826..198203841,+ | |short_description=p@chr1:198203826..198203841,+ | ||
}} | }} |
Latest revision as of 01:53, 28 July 2015
Short description: | p@chr1:198203826..198203841, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:198203826..198203841, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 2.08e-24 | 2 |
mesothelial cell | 2.17e-15 | 19 |
androgen binding protein secreting cell | 4.23e-13 | 1 |
seminiferous tubule epithelial cell | 4.23e-13 | 1 |
Sertoli cell | 4.23e-13 | 1 |
fibroblast of pulmonary artery | 8.64e-13 | 1 |
smooth muscle cell of the subclavian artery | 2.35e-10 | 5 |
thoracic aorta endothelial cell | 5.28e-07 | 2 |
lining cell | 6.82e-07 | 58 |
barrier cell | 6.82e-07 | 58 |
mesodermal cell | 9.45e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.98e-36 | 3 |
leiomyoma | 2.98e-36 | 3 |
benign neoplasm | 2.21e-27 | 4 |