FFCP PHASE1:Hg19::chr1:196902827..196902855,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:196902827..196902855,- | |||
|description=CAGE_peak_at_chr1:196902827..196902855,- | |description=CAGE_peak_at_chr1:196902827..196902855,- | ||
|id=chr1:196902827..196902855,- | |id=chr1:196902827..196902855,- | ||
|ontology_enrichment_celltype=CL:0000054!3.12e-09!2;CL:0000137!3.12e-09!2;CL:0000092!3.12e-09!2 | |ontology_enrichment_celltype=CL:0000054!3.12e-09!2;CL:0000137!3.12e-09!2;CL:0000092!3.12e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000319;3.01e-07;1!CL:0002379;4.21e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,3.01e-07,1;CL:0002379,3.62e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.39e-21!235;DOID:14566!1.84e-20!239;DOID:0050687!1.59e-17!143;DOID:305!6.68e-11!106;DOID:0050686!1.68e-10!137;DOID:4468!8.03e-10!2;DOID:299!1.54e-09!25;DOID:200!3.12e-09!2;DOID:4305!3.12e-09!2;DOID:1036!4.25e-09!8;DOID:3119!3.46e-07!14;DOID:1115!7.08e-07!20 | |ontology_enrichment_disease=DOID:162!4.39e-21!235;DOID:14566!1.84e-20!239;DOID:0050687!1.59e-17!143;DOID:305!6.68e-11!106;DOID:0050686!1.68e-10!137;DOID:4468!8.03e-10!2;DOID:299!1.54e-09!25;DOID:200!3.12e-09!2;DOID:4305!3.12e-09!2;DOID:1036!4.25e-09!8;DOID:3119!3.46e-07!14;DOID:1115!7.08e-07!20 | ||
|ontology_enrichment_disease_v019=DOID:4468;1.56e-13;2!DOID:1036;6.30e-13;8!DOID:299;4.76e-11;25!DOID:0060085;2.21e-07;1!DOID:0050619;2.21e-07;1!DOID:3165;2.21e-07;1!DOID:0060121;2.21e-07;1!DOID:2438;2.21e-07;1!DOID:4418;2.21e-07;1!DOID:1357;2.21e-07;1!DOID:3030;3.01e-07;1!DOID:3620;4.21e-07;1!DOID:3565;4.21e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.86e-16,235;DOID:14566,5.30e-16,239;DOID:4468,1.61e-13,2;DOID:1036,6.80e-13,8;DOID:0050687,7.03e-13,143;DOID:299,4.88e-11,25;DOID:0050686,2.92e-09,137;DOID:305,1.81e-08,106;DOID:0060085,1.72e-07,1;DOID:3165,1.72e-07,1;DOID:0060121,1.72e-07,1;DOID:2438,1.72e-07,1;DOID:4418,1.72e-07,1;DOID:0050619,2.66e-07,1;DOID:1357,2.66e-07,1;DOID:3030,3.01e-07,1;DOID:3620,3.62e-07,1;DOID:3565,3.62e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.14e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.21e-07;1!UBERON:0001764;2.21e-07;1!UBERON:0009842;2.21e-07;1!UBERON:0003704;2.21e-07;1!UBERON:0001825;2.21e-07;1!UBERON:0001171;2.21e-07;1!UBERON:0001172;2.21e-07;1!UBERON:0000473;4.78e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.50e-07,1;UBERON:0009842,2.50e-07,1;UBERON:0003704,2.50e-07,1;UBERON:0001171,2.50e-07,1;UBERON:0001172,2.50e-07,1;UBERON:0001764,2.66e-07,1;UBERON:0001825,2.66e-07,1;UBERON:0000473,4.93e-07,8 | |||
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| ||
|short_description=p@chr1:196902827..196902855,- | |short_description=p@chr1:196902827..196902855,- | ||
}} | }} |
Latest revision as of 01:49, 28 July 2015
Short description: | p@chr1:196902827..196902855, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:196902827..196902855, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 3.01e-07 | 1 |
meningothelial cell | 3.62e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 2.50e-07 | 1 |
acinus | 2.50e-07 | 1 |
intrahepatic bile duct | 2.50e-07 | 1 |
portal lobule | 2.50e-07 | 1 |
hepatic acinus | 2.50e-07 | 1 |
maxillary sinus | 2.66e-07 | 1 |
paranasal sinus | 2.66e-07 | 1 |
testis | 4.93e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.86e-16 | 235 |
disease of cellular proliferation | 5.30e-16 | 239 |
clear cell adenocarcinoma | 1.61e-13 | 2 |
chronic leukemia | 6.80e-13 | 8 |
cell type cancer | 7.03e-13 | 143 |
adenocarcinoma | 4.88e-11 | 25 |
organ system cancer | 2.92e-09 | 137 |
carcinoma | 1.81e-08 | 106 |
organ system benign neoplasm | 1.72e-07 | 1 |
skin benign neoplasm | 1.72e-07 | 1 |
integumentary system benign neoplasm | 1.72e-07 | 1 |
dermis tumor | 1.72e-07 | 1 |
cutaneous fibrous histiocytoma | 1.72e-07 | 1 |
paranasal sinus cancer | 2.66e-07 | 1 |
maxillary sinus cancer | 2.66e-07 | 1 |
mucinous adenocarcinoma | 3.01e-07 | 1 |
central nervous system cancer | 3.62e-07 | 1 |
meningioma | 3.62e-07 | 1 |