FFCP PHASE1:Hg19::chr1:196373343..196373364,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:196373343..196373364,- | |||
|description=CAGE_peak_at_chr1:196373343..196373364,- | |description=CAGE_peak_at_chr1:196373343..196373364,- | ||
|id=chr1:196373343..196373364,- | |id=chr1:196373343..196373364,- | ||
|ontology_enrichment_celltype=CL:0000077!8.43e-11!19 | |ontology_enrichment_celltype=CL:0000077!8.43e-11!19 | ||
|ontology_enrichment_celltype_v019=CL:0002579;1.31e-15;3!CL:0002334;8.24e-15;12!CL:0000136;8.96e-14;13!CL:0002617;3.24e-11;2!CL:0002195;5.67e-11;2!CL:0002571;5.67e-11;2!CL:0000746;6.46e-08;3!CL:0002580;7.79e-08;3!CL:0002615;8.92e-08;3!CL:0002616;7.48e-07;1 | |ontology_enrichment_celltype_v019=CL:0002579;1.31e-15;3!CL:0002334;8.24e-15;12!CL:0000136;8.96e-14;13!CL:0002617;3.24e-11;2!CL:0002195;5.67e-11;2!CL:0002571;5.67e-11;2!CL:0000746;6.46e-08;3!CL:0002580;7.79e-08;3!CL:0002615;8.92e-08;3!CL:0002616;7.48e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002579,1.22e-15,3;CL:0002334,8.25e-15,12;CL:0000136,8.00e-12,15;CL:0002617,3.00e-11,2;CL:0002195,4.08e-11,2;CL:0002571,4.08e-11,2;CL:0000746,5.73e-08,3;CL:0000513,5.73e-08,3;CL:0002580,8.34e-08,3;CL:0002615,1.13e-07,3;CL:0002616,7.49e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000513;6.46e-08;3 | |ontology_enrichment_development_v019=CL:0000513;6.46e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.24e-08!115;UBERON:0003688!1.73e-07!6;UBERON:0002358!1.73e-07!6;UBERON:0003684!1.73e-07!6;UBERON:0001178!1.73e-07!6;UBERON:0002100!9.53e-07!216 | |ontology_enrichment_uberon=UBERON:0007023!2.24e-08!115;UBERON:0003688!1.73e-07!6;UBERON:0002358!1.73e-07!6;UBERON:0003684!1.73e-07!6;UBERON:0001178!1.73e-07!6;UBERON:0002100!9.53e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.96e-21;6!UBERON:0002358;6.96e-21;6!UBERON:0003684;6.96e-21;6!UBERON:0001178;6.96e-21;6!UBERON:0004457;7.39e-14;9!UBERON:0000042;7.39e-14;9!UBERON:0005406;6.78e-12;2!UBERON:0000310;2.18e-08;10!UBERON:0001443;1.25e-07;11!UBERON:0007195;8.34e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0003688;6.96e-21;6!UBERON:0002358;6.96e-21;6!UBERON:0003684;6.96e-21;6!UBERON:0001178;6.96e-21;6!UBERON:0004457;7.39e-14;9!UBERON:0000042;7.39e-14;9!UBERON:0005406;6.78e-12;2!UBERON:0000310;2.18e-08;10!UBERON:0001443;1.25e-07;11!UBERON:0007195;8.34e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.77e-21,6;UBERON:0002358,8.77e-21,6;UBERON:0003684,8.77e-21,6;UBERON:0001178,8.77e-21,6;UBERON:0005406,6.61e-12,2;UBERON:0004457,2.76e-10,12;UBERON:0000042,2.76e-10,12;UBERON:0000310,2.20e-08,10;UBERON:0001443,1.26e-07,11;UBERON:0004145,1.38e-07,3;UBERON:0000948,3.29e-07,24;UBERON:0005498,3.29e-07,24;UBERON:0004140,3.29e-07,24;UBERON:0009881,3.29e-07,24;UBERON:0004141,3.29e-07,24;UBERON:0003084,3.29e-07,24;UBERON:0007005,3.29e-07,24;UBERON:0004139,3.29e-07,24;UBERON:0004291,3.29e-07,24;UBERON:0009569,6.63e-07,112;UBERON:0007195,8.34e-07,1 | |||
|phase1_expression=6.17706489519893,1.49870366723688,9.86680828671798,1.0007329835313,0,14.8297549097063,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,3.58015173161885,0,0,0,0,0,0,0.443458794925128,0.351339142772504,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.759783069987479,0.132409180813219,0,0,0,0,0,3.7345324247972,0.269421344139376,0.817309515567294,0.908144565869588,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,1.02088964844019,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,4.3441216867254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,3.43147184779554,0,0,0,1.77695974371273,0,0.301439377059586,0.871533458600294,0.499864955910285,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47350930946288,3.06923946576125,0.280660094433074,5.12556597022804,1.53512174720011,1.44768529029247,5.93672265779964,0,0,0,0,0,0,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,2.62411716559765,0.976135183992909,0.618246069886334,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0,0.949138274156178,4.00323407240032,0.255897791311334,0,0,0,0.899362287916574,0,0.117812402345686,0,6.34041284692033,0,0,1.46228093778771,0,0.136499911407986,0,0,0,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0,0,0.286822704408103,0.196498082026242,0.7133421029625,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.197286811273867,0,10.0023291130173,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0.32681539055697,0,0.0769502585037971,0.341826167541004,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,1.16107597546902,1.75414361006845,0.574808199372465,0.193978032976839,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.558564802544508,0,4.30723814746088,0,0,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0.25426853765475,0,1.72844298240254,0,0,0,0,0,0,0,0,0,0,0,3.31040978959853,1.10043013569766,0.414239055347196,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,2.28483127301277,0.406870733204662,0,0,0,0,0,0,0,2.52369796457302,0.385239660814607,13.5098202566203,0,0.226705925512272,0.231522474323834,0.734210113519403,0,0.308801447160972,0.438568099157414,0,0.38582807654183,0,0,4.14516410077438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0.49131575253029,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0.91064876540519,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.103432995861895,0.639701945702943,0,0,0,1.12131862580613,2.29129769801394,0,0.435433495793923,0,0.134704106029175,0.502055437748735,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 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| ||
|short_description=p@chr1:196373343..196373364,- | |short_description=p@chr1:196373343..196373364,- | ||
}} | }} |
Latest revision as of 01:47, 28 July 2015
Short description: | p@chr1:196373343..196373364, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:196373343..196373364, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 1.22e-15 | 3 |
preadipocyte | 8.25e-15 | 12 |
fat cell | 8.00e-12 | 15 |
adipocyte of breast | 3.00e-11 | 2 |
hepatic stem cell | 4.08e-11 | 2 |
hepatic mesenchymal stem cell | 4.08e-11 | 2 |
cardiac muscle cell | 5.73e-08 | 3 |
cardiac muscle myoblast | 5.73e-08 | 3 |
preadipocyte of the breast | 8.34e-08 | 3 |
adipocyte of omentum tissue | 1.13e-07 | 3 |
perirenal adipocyte cell | 7.49e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.77e-21 | 6 |
peritoneum | 8.77e-21 | 6 |
abdominal cavity | 8.77e-21 | 6 |
visceral peritoneum | 8.77e-21 | 6 |
perirenal fat | 6.61e-12 | 2 |
cavity lining | 2.76e-10 | 12 |
serous membrane | 2.76e-10 | 12 |
breast | 2.20e-08 | 10 |
chest | 1.26e-07 | 11 |
outflow tract | 1.38e-07 | 3 |
heart | 3.29e-07 | 24 |
primitive heart tube | 3.29e-07 | 24 |
primary heart field | 3.29e-07 | 24 |
anterior lateral plate mesoderm | 3.29e-07 | 24 |
heart tube | 3.29e-07 | 24 |
heart primordium | 3.29e-07 | 24 |
cardiac mesoderm | 3.29e-07 | 24 |
cardiogenic plate | 3.29e-07 | 24 |
heart rudiment | 3.29e-07 | 24 |
subdivision of trunk | 6.63e-07 | 112 |
stroma of bone marrow | 8.34e-07 | 1 |