FFCP PHASE1:Hg19::chr1:193232079..193232084,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:193232079..193232084,+ | |||
|coexpression_cluster_id=C184 | |coexpression_cluster_id=C184 | ||
|description=CAGE_peak_at_chr1:193232079..193232084,+ | |description=CAGE_peak_at_chr1:193232079..193232084,+ | ||
|id=chr1:193232079..193232084,+ | |id=chr1:193232079..193232084,+ | ||
|ontology_enrichment_celltype=CL:0000167;5.42e-195;1!CL:0000164;5.42e-195;1!CL:0000502;5.42e-195;1!CL:0000172;5.42e-195;1!CL:0000173;5.42e-195;1!CL:0000150;2.62e-23;9!CL:0000163;2.62e-23;9!CL:0000151;2.32e-07;36 | |ontology_enrichment_celltype=CL:0000167!2.16e-26!1;CL:0000164!2.16e-26!1;CL:0000502!2.16e-26!1;CL:0000172!2.16e-26!1;CL:0000173!2.16e-26!1;CL:0002351!2.16e-26!1 | ||
| | |ontology_enrichment_celltype_v019=CL:0000167;5.42e-195;1!CL:0000164;5.42e-195;1!CL:0000502;5.42e-195;1!CL:0000172;5.42e-195;1!CL:0000173;5.42e-195;1!CL:0000150;2.62e-23;9!CL:0000163;2.62e-23;9!CL:0000151;2.32e-07;36 | ||
|ontology_enrichment_disease=DOID:4430;5.42e-195;1!DOID:169;4.27e-34;6!DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |ontology_enrichment_celltype_v019_2=CL:0000167,5.42e-195,1;CL:0000164,5.42e-195,1;CL:0000502,5.42e-195,1;CL:0000172,5.42e-195,1;CL:0000173,5.42e-195,1;CL:0002351,5.42e-195,1;CL:0000150,2.62e-23,9;CL:0000163,2.62e-23,9;CL:0000151,5.81e-07,36 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0002351;5.42e-195;1 | ||
|ontology_enrichment_disease=DOID:4430!2.16e-26!1;DOID:0050619!5.93e-26!1;DOID:1357!5.93e-26!1;DOID:3371!1.26e-25!1;DOID:4549!1.26e-25!1;DOID:5861!1.26e-25!1;DOID:6496!1.26e-25!1;DOID:169!1.57e-17!6;DOID:171!6.28e-11!10 | |||
|ontology_enrichment_disease_v019=DOID:4430;5.42e-195;1!DOID:169;4.27e-34;6!DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,5.42e-195,1;DOID:169,4.27e-34,6;DOID:171,3.81e-21,10;DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0005418!3.58e-26!1;UBERON:0001389!3.58e-26!1;UBERON:0000026!3.58e-26!1;UBERON:0008784!3.58e-26!1;UBERON:0006058!3.58e-26!1;UBERON:0003663!3.58e-26!1;UBERON:0001383!3.58e-26!1;UBERON:0004256!3.58e-26!1;UBERON:0002529!3.58e-26!1;UBERON:0004708!3.58e-26!1;UBERON:0002101!3.58e-26!1;UBERON:0004709!3.58e-26!1;UBERON:0003661!3.58e-26!1;UBERON:0002471!3.58e-26!1;UBERON:0004357!3.58e-26!1;UBERON:0009872!3.58e-26!1;UBERON:0004347!3.58e-26!1;UBERON:0005420!3.58e-26!1;UBERON:0005732!3.58e-26!1;UBERON:0006057!3.58e-26!1;UBERON:0000978!3.58e-26!1;UBERON:0002103!3.58e-26!1;UBERON:0001665!3.58e-26!1;UBERON:0003823!3.58e-26!1;UBERON:0000154!3.58e-26!1;UBERON:0005733!3.58e-26!1;UBERON:0005730!3.58e-26!1;UBERON:0001764!5.93e-26!1;UBERON:0001825!5.93e-26!1;UBERON:0001630!8.28e-14!2;UBERON:0005090!8.28e-14!2;UBERON:0002418!1.81e-09!3;UBERON:0004755!1.81e-09!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr1:193232079..193232084,+ | |short_description=p@chr1:193232079..193232084,+ | ||
}} | }} |
Latest revision as of 01:44, 28 July 2015
Short description: | p@chr1:193232079..193232084, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:193232079..193232084, + |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 5.42e-195 | 1 |
enteroendocrine cell | 5.42e-195 | 1 |
type D enteroendocrine cell | 5.42e-195 | 1 |
somatostatin secreting cell | 5.42e-195 | 1 |
pancreatic D cell | 5.42e-195 | 1 |
progenitor cell of endocrine pancreas | 5.42e-195 | 1 |
glandular epithelial cell | 2.62e-23 | 9 |
endocrine cell | 2.62e-23 | 9 |
secretory cell | 5.81e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 5.42e-195 | 1 |
neuroendocrine tumor | 4.27e-34 | 6 |
neuroectodermal tumor | 3.81e-21 | 10 |
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |