FFCP PHASE1:Hg19::chr1:19043012..19043015,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:19043012..19043015,+ | |||
|description=CAGE_peak_at_chr1:19043012..19043015,+ | |||
|id=chr1:19043012..19043015,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;6.34e-08;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.84e-34;1!UBERON:0005062;1.38e-09;4!UBERON:0007284;1.38e-09;4 | |||
|ontology_enrichment_disease=DOID:171!4.35e-18!10;DOID:3095!4.06e-08!22;DOID:2994!4.06e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3193;8.34e-18;2!DOID:962;8.34e-18;2!DOID:171;2.94e-14;10!DOID:1192;2.45e-12;3!DOID:3095;5.17e-07;22!DOID:2994;5.17e-07;22!DOID:169;8.25e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,7.67e-18,2;DOID:962,7.67e-18,2;DOID:171,2.84e-14,10;DOID:1192,2.31e-12,3;DOID:3095,5.09e-07,22;DOID:2994,5.09e-07,22;DOID:169,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000341!2.59e-15!2;UBERON:0003978!6.79e-11!3;UBERON:0009751!6.79e-11!3;UBERON:0000946!6.79e-11!3;UBERON:0002523!6.79e-11!3;UBERON:0005983!6.79e-11!3;UBERON:0002165!6.79e-11!3;UBERON:0002062!6.79e-11!3;UBERON:0007280!6.79e-11!3;UBERON:0002134!7.01e-09!1;UBERON:0005208!7.01e-09!1;UBERON:0005946!7.01e-09!1;UBERON:0005965!7.01e-09!1;UBERON:0002078!7.01e-09!1;UBERON:0002146!1.02e-08!1;UBERON:0005623!1.02e-08!1;UBERON:0000013!9.70e-07!5;UBERON:0002410!9.70e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;4.27e-34;1!UBERON:0005208;4.27e-34;1!UBERON:0004145;4.27e-34;1!UBERON:0005946;4.27e-34;1!UBERON:0005965;4.27e-34;1!UBERON:0002078;4.27e-34;1!UBERON:0003714;8.34e-18;2!UBERON:0002081;8.34e-18;2!UBERON:0002133;8.34e-18;2!UBERON:0003978;2.45e-12;3!UBERON:0004151;2.45e-12;3!UBERON:0000946;2.45e-12;3!UBERON:0002346;1.22e-09;4!UBERON:0000923;1.22e-09;4!UBERON:0010316;1.22e-09;4!UBERON:0005291;1.22e-09;4!UBERON:0002050;5.73e-08;5!UBERON:0005423;5.73e-08;5!UBERON:0000013;6.34e-08;5!UBERON:0002410;6.34e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,5.05e-34,1;UBERON:0005208,5.05e-34,1;UBERON:0005946,5.05e-34,1;UBERON:0005965,5.05e-34,1;UBERON:0002078,5.05e-34,1;UBERON:0003714,7.67e-18,2;UBERON:0002081,9.07e-18,2;UBERON:0002133,9.07e-18,2;UBERON:0010227,9.07e-18,2;UBERON:0003978,2.59e-12,3;UBERON:0009751,2.59e-12,3;UBERON:0004151,2.59e-12,3;UBERON:0000946,2.59e-12,3;UBERON:0002523,2.59e-12,3;UBERON:0005983,2.59e-12,3;UBERON:0004145,2.59e-12,3;UBERON:0002165,2.59e-12,3;UBERON:0002062,2.59e-12,3;UBERON:0007280,2.59e-12,3;UBERON:0000013,6.13e-08,5;UBERON:0002410,6.13e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,2.15361907373044,0,0,0,0,0,1.16495949527454,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.33946505990805,3.40119872162693,0,2.23457967189298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69281884806909,0,0,0,0,0 | |||
|short_description=p@chr1:19043012..19043015,+ | |||
}} |
Latest revision as of 01:36, 28 July 2015
Short description: | p@chr1:19043012..19043015, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:19043012..19043015, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 5.05e-34 | 1 |
right atrium valve | 5.05e-34 | 1 |
outflow tract of atrium | 5.05e-34 | 1 |
outflow part of right atrium | 5.05e-34 | 1 |
right cardiac atrium | 5.05e-34 | 1 |
neural tissue | 7.67e-18 | 2 |
cardiac atrium | 9.07e-18 | 2 |
atrioventricular valve | 9.07e-18 | 2 |
future cardiac atrium | 9.07e-18 | 2 |
valve | 2.59e-12 | 3 |
cardiac mesenchyme | 2.59e-12 | 3 |
cardiac chamber | 2.59e-12 | 3 |
cardial valve | 2.59e-12 | 3 |
tunica intima | 2.59e-12 | 3 |
heart layer | 2.59e-12 | 3 |
outflow tract | 2.59e-12 | 3 |
endocardium | 2.59e-12 | 3 |
endocardial cushion | 2.59e-12 | 3 |
presumptive endocardium | 2.59e-12 | 3 |
sympathetic nervous system | 6.13e-08 | 5 |
autonomic nervous system | 6.13e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 7.67e-18 | 2 |
neurofibroma | 7.67e-18 | 2 |
neuroectodermal tumor | 2.84e-14 | 10 |
peripheral nervous system neoplasm | 2.31e-12 | 3 |
germ cell and embryonal cancer | 5.09e-07 | 22 |
germ cell cancer | 5.09e-07 | 22 |
neuroendocrine tumor | 8.02e-07 | 6 |