FFCP PHASE1:Hg19::chr1:183099514..183099543,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:183099514..183099543,- | |||
|description=CAGE_peak_at_chr1:183099514..183099543,- | |description=CAGE_peak_at_chr1:183099514..183099543,- | ||
|id=chr1:183099514..183099543,- | |id=chr1:183099514..183099543,- | ||
|ontology_enrichment_celltype=CL:0000548!1.01e-15!679;CL:0000004!1.01e-15!679;CL:0000255!1.01e-15!679;CL:0000012!3.06e-15!682;CL:0000055!3.69e-15!180;CL:0000057!1.15e-12!75;CL:0000144!1.72e-11!625;CL:0000003!1.01e-09!722;CL:0002321!1.74e-09!248;CL:0002334!2.23e-09!12;CL:0000220!4.60e-09!246;CL:0002371!1.25e-07!591;CL:0000066!8.08e-07!254;CL:0000222!8.42e-07!119 | |ontology_enrichment_celltype=CL:0000548!1.01e-15!679;CL:0000004!1.01e-15!679;CL:0000255!1.01e-15!679;CL:0000012!3.06e-15!682;CL:0000055!3.69e-15!180;CL:0000057!1.15e-12!75;CL:0000144!1.72e-11!625;CL:0000003!1.01e-09!722;CL:0002321!1.74e-09!248;CL:0002334!2.23e-09!12;CL:0000220!4.60e-09!246;CL:0002371!1.25e-07!591;CL:0000066!8.08e-07!254;CL:0000222!8.42e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002334;8.62e-13;12!CL:0002582;7.83e-11;3!CL:0002195;1.23e-07;2!CL:0002571;1.23e-07;2!CL:0002617;1.23e-07;2!CL:0002593;1.23e-07;2!CL:0002600;3.16e-07;2 | |ontology_enrichment_celltype_v019=CL:0002334;8.62e-13;12!CL:0002582;7.83e-11;3!CL:0002195;1.23e-07;2!CL:0002571;1.23e-07;2!CL:0002617;1.23e-07;2!CL:0002593;1.23e-07;2!CL:0002600;3.16e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,7.01e-13,12;CL:0002582,6.71e-11,3;CL:0002617,9.19e-08,2;CL:0002593,1.72e-07,2;CL:0002195,1.84e-07,2;CL:0002571,1.84e-07,2;CL:0002600,2.38e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.20e-09;9!UBERON:0000042;8.20e-09;9!UBERON:0002456;1.23e-07;2!UBERON:0003513;1.50e-07;7!UBERON:0004909;3.16e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0004457;8.20e-09;9!UBERON:0000042;8.20e-09;9!UBERON:0002456;1.23e-07;2!UBERON:0003513;1.50e-07;7!UBERON:0004909;3.16e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,1.18e-07,7;UBERON:0002456,1.72e-07,2;UBERON:0004909,2.09e-07,2;UBERON:0004872,2.93e-07,83 | |||
|phase1_expression=2.18014055124668,1.71280419112787,0.563817616383885,1.0007329835313,1.34088328328186,0,0,0.631719873426831,2.08948502559871,0,0,0.218441372130172,0,0.495065411840187,0.662794751455832,0,1.20538905604795,0,0,0.123121058076788,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,1.53435074212236,2.89151321907653,0,1.30361867064741,0,0.486634870302636,0.283604451492204,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,1.37559020970034,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0.976248230192678,0.367663080345869,4.0507097394088,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,1.98788780678127,0.506522046658319,0.264818361626438,4.58938593198102,1.77334191099179,0,1.06748995729705,0.74000264525148,0,0.404132016209064,0.163461903113459,0.756787138224657,0.576175924479999,0.234321431833797,0.624320153660641,0,1.19558944441441,0,0,0.140450806702248,0,0.491337269247072,0,0,0.989067717114227,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.600952235626387,0.226864366320042,0.179389635688862,0.427114777637135,0.423863802319124,0.600182192168805,0.206105058476878,0.772921620136887,0.744467425326359,0.675105328965065,0.0974370051611986,0.504867548488229,0.644349290496095,0.323292113637624,0.710019185033229,0.10075209822764,0.847802961552438,0.193260853163297,0,0.286804595389004,0.243947412259191,0.530119073285941,0.232387885739037,0.10366105501537,0.252320850875628,0,0,1.28648187638577,0,2.3218396401599,0,0.118306800039844,0.505754070234305,0.482022059766964,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0.769494313892781,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.219500570817251,0,0.201057944823262,0.370353780634118,0,0,0,0.463721619900307,0.117408694235822,0.288732895522148,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0.283550194484773,0.626909658919938,0.871901815541886,0,0,0,0,0,0,0.126995788584338,0,0,1.71072446022705,0.205654985406647,0,0,0.112131084345361,0,0.66004457238855,0.258543431515556,0,0,1.32969058292435,0,0.257207374262142,0,0,2.57360388584666,0.542621605391443,0,0.65147236858747,1.06617584622764,0,0,0,0.199945982364114,0,0.502257091432126,0,1.19812427745791,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,1.10422342547226,1.50051156317903,0.542530047399471,3.32753378449291,3.7470087647404,2.36553622550902,0.937131319941706,0,0,0,0,0,0.521301686808497,0,0.343143423810856,0,0,0,0,1.66435439510497,0.604780586659361,0.496215615637554,0.460385919864187,1.96462066103151,0.256278298511402,1.02341449813341,0.804269605718038,2.96836132889982,0.925258162815933,2.48586415438378,1.64254312027618,2.07701771673448,2.67283870457906,0.241718899183244,0,0.368323955743585,0,0.910455840033585,0.655622074797121,0,0.462092022626489,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.580024309752732,0.616194468458578,0.921022048356777,0.275673144969061,0.966782203814463,0.580066775656914,0.340906509664404,0.712256285173899,0,0.192190067365106,0.127612712494584,0.2023155617111,0,2.51849877464512,0,1.23213432070436,0,0,0,0,0,0,0.762520775695299,0,0.42793898803392,0.636406495851874,0,0,0.274537029736055,0.353437207037059,0,0,0,0.48763373908959,2.92456187557541,1.05650146756755,0.272999822815972,0.565621727814851,0,0,1.99031692572366,0,1.15755106853338,1.9676842561399,0.202910376962704,0,0.563391205064483,0.143411352204052,0.392996164052485,0,0,1.05553817648832,4.28083360847872,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0.568272293612826,0.23874448473769,0,0.307160702099232,0,0,0.111308705022906,0.329607748453519,0,0,0,0.251932747854276,0.102268682502155,0.123084805461069,1.24415835064723,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0.23056390438806,0.448788222048861,0.651884231532048,0.638002319463839,0,0,0,0,0,0,0,0,0,0,1.68798451622422,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0,0,0,0.554698692052555,0.173559738335131,0,0.34823682632161,0.34945333648406,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0.451961481561065,0.411125773940253,0,0,0.391102765469606,0,0.85381197895741,1.39866726707491,0,0.229073192331831,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| ||
|short_description=p@chr1:183099514..183099543,- | |short_description=p@chr1:183099514..183099543,- | ||
}} | }} |
Latest revision as of 01:08, 28 July 2015
Short description: | p@chr1:183099514..183099543, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183099514..183099543, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 7.01e-13 | 12 |
visceral preadipocyte | 6.71e-11 | 3 |
adipocyte of breast | 9.19e-08 | 2 |
smooth muscle cell of the internal thoracic artery | 1.72e-07 | 2 |
hepatic stem cell | 1.84e-07 | 2 |
hepatic mesenchymal stem cell | 1.84e-07 | 2 |
smooth muscle cell of trachea | 2.38e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 1.18e-07 | 7 |
internal thoracic artery | 1.72e-07 | 2 |
epithelium of gonad | 2.09e-07 | 2 |
splanchnic layer of lateral plate mesoderm | 2.93e-07 | 83 |