FFCP PHASE1:Hg19::chr1:178569076..178569079,+: Difference between revisions
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|id=chr1:178569076..178569079,+
|short_description=p@chr1:178569076..178569079,+
|description=CAGE_peak_at_chr1:178569076..178569079,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:178569076..178569079,+ | |||
|coexpression_cluster_id=C979 | |||
|description=CAGE_peak_at_chr1:178569076..178569079,+ | |||
|id=chr1:178569076..178569079,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.02e-23!42;CL:0000860!8.65e-22!45;CL:0000839!1.30e-18!70;CL:0000557!2.87e-18!71;CL:0002194!1.88e-17!63;CL:0000576!1.88e-17!63;CL:0000040!1.88e-17!63;CL:0000559!1.88e-17!63;CL:0002009!9.42e-17!65;CL:0000766!1.11e-16!76;CL:0000763!1.74e-09!112;CL:0000049!1.74e-09!112;CL:0000048!6.19e-09!430;CL:0002031!6.95e-09!124;CL:0000723!1.21e-08!436;CL:0005020!1.67e-08!6;CL:0002138!1.67e-08!6;CL:0005022!1.67e-08!6;CL:0000034!2.88e-08!444;CL:0002087!1.22e-07!119;CL:0000738!3.11e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.32e-28;39!CL:0000234;1.32e-28;39!CL:0000860;2.50e-28;33!CL:0002057;2.50e-28;33!CL:0000576;2.29e-15;48!CL:0000766;5.44e-12;69!CL:0000235;5.84e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.64e-33,48;CL:0000234,1.64e-33,48;CL:0000839,5.53e-29,66;CL:0000557,1.51e-28,67;CL:0002194,1.09e-26,59;CL:0000576,1.09e-26,59;CL:0000040,1.09e-26,59;CL:0000559,1.09e-26,59;CL:0000766,1.52e-26,72;CL:0002009,8.31e-26,61;CL:0000860,1.24e-24,42;CL:0002057,1.24e-24,42;CL:0000763,1.58e-17,108;CL:0000049,1.58e-17,108;CL:0002031,1.04e-15,120;CL:0000738,8.94e-14,136;CL:0002087,1.87e-13,115;CL:0000235,6.70e-12,6;CL:0002032,1.64e-11,161;CL:0000837,1.64e-11,161;CL:0000037,5.38e-11,168;CL:0000988,2.16e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.57e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.93e-19!80;UBERON:0001474!5.63e-17!86;UBERON:0002193!1.37e-16!112;UBERON:0002405!5.79e-16!115;UBERON:0004765!1.63e-13!101;UBERON:0001434!1.63e-13!101;UBERON:0002390!2.55e-13!102;UBERON:0003061!2.55e-13!102;UBERON:0002204!2.15e-12!167;UBERON:0003081!3.13e-09!216;UBERON:0002119!1.87e-07!4;UBERON:0004531!1.87e-07!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.96e-25,76;UBERON:0001474,2.92e-23,82;UBERON:0004765,3.77e-21,90;UBERON:0002405,1.89e-20,93;UBERON:0002390,2.23e-19,98;UBERON:0003061,2.23e-19,98;UBERON:0001434,5.58e-19,100;UBERON:0002193,1.58e-17,108;UBERON:0002204,4.56e-11,167;UBERON:0003081,6.06e-09,203 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,2.3015391385772,1.0246428261164,5.20260905754887,0,0,0,0,0,0.674170453335254,0.306083892370903,0.962787081228281,0.639337125799041,0.329851300186716,0.199463657621632,0.426224750532694,0.870627715885752,0.56738522469114,2.4912889959823,1.00499466102697,2.60741459210101,3.25783267057675,0,1.10483290796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,8.86793828212698,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0,0,0.295710299979268,0.159296767163702,1.79921244865442,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:178569076..178569079,+ | |||
}} | }} |
Latest revision as of 00:48, 28 July 2015
Short description: | p@chr1:178569076..178569079, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:178569076..178569079, + |
Coexpression cluster: | C979_Mast_CD14_Eosinophils_immature_Neutrophils_CD4_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.64e-33 | 48 |
phagocyte | 1.64e-33 | 48 |
myeloid lineage restricted progenitor cell | 5.53e-29 | 66 |
granulocyte monocyte progenitor cell | 1.51e-28 | 67 |
monopoietic cell | 1.09e-26 | 59 |
monocyte | 1.09e-26 | 59 |
monoblast | 1.09e-26 | 59 |
promonocyte | 1.09e-26 | 59 |
myeloid leukocyte | 1.52e-26 | 72 |
macrophage dendritic cell progenitor | 8.31e-26 | 61 |
classical monocyte | 1.24e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-24 | 42 |
myeloid cell | 1.58e-17 | 108 |
common myeloid progenitor | 1.58e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 1.04e-15 | 120 |
leukocyte | 8.94e-14 | 136 |
nongranular leukocyte | 1.87e-13 | 115 |
macrophage | 6.70e-12 | 6 |
hematopoietic oligopotent progenitor cell | 1.64e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-11 | 161 |
hematopoietic stem cell | 5.38e-11 | 168 |
hematopoietic cell | 2.16e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.96e-25 | 76 |
bone element | 2.92e-23 | 82 |
skeletal element | 3.77e-21 | 90 |
immune system | 1.89e-20 | 93 |
hematopoietic system | 2.23e-19 | 98 |
blood island | 2.23e-19 | 98 |
skeletal system | 5.58e-19 | 100 |
hemolymphoid system | 1.58e-17 | 108 |
musculoskeletal system | 4.56e-11 | 167 |
lateral plate mesoderm | 6.06e-09 | 203 |