FFCP PHASE1:Hg19::chr1:172425609..172425633,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:172425609..172425633,- | |||
|coexpression_cluster_id=C478 | |coexpression_cluster_id=C478 | ||
|description=CAGE_peak_at_chr1:172425609..172425633,- | |description=CAGE_peak_at_chr1:172425609..172425633,- | ||
|id=chr1:172425609..172425633,- | |id=chr1:172425609..172425633,- | ||
|ontology_enrichment_celltype=CL:0000764!4.05e-08!2;CL:0000765!4.05e-08!2;CL:0000050!4.05e-08!2;CL:0000038!4.05e-08!2;CL:0000558!4.05e-08!2;CL:0000547!4.05e-08!2;CL:0000549!4.05e-08!2;CL:0000550!4.05e-08!2;CL:0000552!4.05e-08!2 | |ontology_enrichment_celltype=CL:0000764!4.05e-08!2;CL:0000765!4.05e-08!2;CL:0000050!4.05e-08!2;CL:0000038!4.05e-08!2;CL:0000558!4.05e-08!2;CL:0000547!4.05e-08!2;CL:0000549!4.05e-08!2;CL:0000550!4.05e-08!2;CL:0000552!4.05e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.08e-22;2!CL:0000558;1.08e-22;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.08e-22,2;CL:0000765,1.08e-22,2;CL:0000050,1.08e-22,2;CL:0000038,1.08e-22,2;CL:0000558,1.08e-22,2;CL:0000547,1.08e-22,2;CL:0000549,1.08e-22,2;CL:0000550,1.08e-22,2;CL:0000552,1.08e-22,2 | |||
|ontology_enrichment_development_v019=UBERON:0004872;5.31e-14;7!UBERON:0000358;5.32e-12;1!UBERON:0003124;5.32e-12;1!UBERON:0004140;1.13e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8552;4.06e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,4.06e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.68e-18!115;UBERON:0002298!1.17e-12!8;UBERON:0003978!6.30e-10!3;UBERON:0009751!6.30e-10!3;UBERON:0000946!6.30e-10!3;UBERON:0002523!6.30e-10!3;UBERON:0005983!6.30e-10!3;UBERON:0002165!6.30e-10!3;UBERON:0002062!6.30e-10!3;UBERON:0007280!6.30e-10!3;UBERON:0006331!1.88e-09!3;UBERON:0000988!2.78e-09!3;UBERON:0003076!1.16e-08!15;UBERON:0003057!1.16e-08!15;UBERON:0002308!4.28e-08!9;UBERON:0000125!4.28e-08!9;UBERON:0001049!7.15e-08!57;UBERON:0005068!7.15e-08!57;UBERON:0006241!7.15e-08!57;UBERON:0007135!7.15e-08!57;UBERON:0003075!1.18e-07!86;UBERON:0007284!1.18e-07!86;UBERON:0002133!2.60e-07!2;UBERON:0003127!3.04e-07!2;UBERON:0002346!3.90e-07!90;UBERON:0001873!4.85e-07!2;UBERON:0010122!4.85e-07!2;UBERON:0002148!8.92e-07!2;UBERON:0009662!8.92e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!1.68e-18!115;UBERON:0002298!1.17e-12!8;UBERON:0003978!6.30e-10!3;UBERON:0009751!6.30e-10!3;UBERON:0000946!6.30e-10!3;UBERON:0002523!6.30e-10!3;UBERON:0005983!6.30e-10!3;UBERON:0002165!6.30e-10!3;UBERON:0002062!6.30e-10!3;UBERON:0007280!6.30e-10!3;UBERON:0006331!1.88e-09!3;UBERON:0000988!2.78e-09!3;UBERON:0003076!1.16e-08!15;UBERON:0003057!1.16e-08!15;UBERON:0002308!4.28e-08!9;UBERON:0000125!4.28e-08!9;UBERON:0001049!7.15e-08!57;UBERON:0005068!7.15e-08!57;UBERON:0006241!7.15e-08!57;UBERON:0007135!7.15e-08!57;UBERON:0003075!1.18e-07!86;UBERON:0007284!1.18e-07!86;UBERON:0002133!2.60e-07!2;UBERON:0003127!3.04e-07!2;UBERON:0002346!3.90e-07!90;UBERON:0001873!4.85e-07!2;UBERON:0010122!4.85e-07!2;UBERON:0002148!8.92e-07!2;UBERON:0009662!8.92e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002426;1.13e-11;1!UBERON:0003831;1.13e-11;1!UBERON:0003898;1.13e-11;1!UBERON:0004830;1.13e-11;1!UBERON:0003830;1.13e-11;1!UBERON:0005175;1.13e-11;1!UBERON:0001774;1.13e-11;1!UBERON:0001103;1.13e-11;1!UBERON:0000922;6.58e-10;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.07e-11,1;UBERON:0003831,1.07e-11,1;UBERON:0003898,1.07e-11,1;UBERON:0004830,1.07e-11,1;UBERON:0003830,1.07e-11,1;UBERON:0005175,1.07e-11,1;UBERON:0001774,1.07e-11,1;UBERON:0001103,1.07e-11,1;UBERON:0010084,1.07e-11,1 | |||
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| ||
|short_description=p@chr1:172425609..172425633,- | |short_description=p@chr1:172425609..172425633,- | ||
}} | }} |
Latest revision as of 00:27, 28 July 2015
Short description: | p@chr1:172425609..172425633, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:172425609..172425633, - |
Coexpression cluster: | C478_blood_Whole_Reticulocytes_liver_skeletal_lung_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.08e-22 | 2 |
erythroblast | 1.08e-22 | 2 |
megakaryocyte-erythroid progenitor cell | 1.08e-22 | 2 |
erythroid progenitor cell | 1.08e-22 | 2 |
reticulocyte | 1.08e-22 | 2 |
proerythroblast | 1.08e-22 | 2 |
basophilic erythroblast | 1.08e-22 | 2 |
polychromatophilic erythroblast | 1.08e-22 | 2 |
orthochromatic erythroblast | 1.08e-22 | 2 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 1.07e-11 | 1 |
respiratory system muscle | 1.07e-11 | 1 |
skeletal muscle of trunk | 1.07e-11 | 1 |
respiratory system skeletal muscle | 1.07e-11 | 1 |
thoracic segment muscle | 1.07e-11 | 1 |
chest organ | 1.07e-11 | 1 |
muscle of trunk | 1.07e-11 | 1 |
diaphragm | 1.07e-11 | 1 |
future diaphragm | 1.07e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 4.06e-12 | 1 |