FFCP PHASE1:Hg19::chr1:16341491..16341518,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:16341491..16341518,-
|short_description=p@chr1:16341491..16341518,-
|description=CAGE_peak_at_chr1:16341491..16341518,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:16341491..16341518,- | |||
|coexpression_cluster_id=C410 | |||
|description=CAGE_peak_at_chr1:16341491..16341518,- | |||
|id=chr1:16341491..16341518,- | |||
|ontology_enrichment_celltype=CL:0000136!2.75e-20!15;CL:0002615!4.53e-07!3;CL:0002334!5.74e-07!12;CL:0002579!5.85e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002617;7.92e-15;2!CL:0002615;7.02e-10;3!CL:0002579;7.51e-10;3!CL:0002580;8.39e-10;3!CL:0002334;4.67e-09;12!CL:0000136;1.50e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.03e-15,15;CL:0002617,7.40e-15,2;CL:0002615,6.00e-10,3;CL:0002579,8.58e-10,3;CL:0002580,9.38e-10,3;CL:0002334,5.25e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.65e-08;1!UBERON:0010227;2.12e-08;1!UBERON:0000358;2.71e-08;1!UBERON:0009143;3.57e-08;1!UBERON:0004874;5.22e-08;1!UBERON:0005062;1.46e-07;4!UBERON:0007284;1.46e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;4.89e-15;2!DOID:178;2.71e-08;1!DOID:326;2.71e-08;1!DOID:3978;2.71e-08;1!DOID:3394;2.71e-08;1!DOID:5844;2.71e-08;1!DOID:1287;6.00e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.89e-15,2;DOID:178,2.71e-08,1;DOID:326,2.71e-08,1;DOID:3978,2.71e-08,1;DOID:3394,2.71e-08,1;DOID:5844,2.71e-08,1;DOID:1287,6.00e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0003688!2.21e-12!6;UBERON:0002358!2.21e-12!6;UBERON:0003684!2.21e-12!6;UBERON:0001178!2.21e-12!6;UBERON:0007023!5.15e-12!115;UBERON:0004457!9.36e-10!12;UBERON:0000042!9.36e-10!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.91e-18;9!UBERON:0000042;2.91e-18;9!UBERON:0003688;5.06e-18;6!UBERON:0002358;5.06e-18;6!UBERON:0003684;5.06e-18;6!UBERON:0001178;5.06e-18;6!UBERON:0007100;9.86e-13;25!UBERON:0000310;4.92e-11;10!UBERON:0004151;1.97e-10;3!UBERON:0001443;4.83e-10;11!UBERON:0003978;8.39e-10;3!UBERON:0000946;8.39e-10;3!UBERON:0002084;1.65e-08;1!UBERON:0002082;1.65e-08;1!UBERON:0002079;2.12e-08;1!UBERON:0002146;3.57e-08;1!UBERON:0005623;3.57e-08;1!UBERON:0000989;5.22e-08;1!UBERON:0008811;5.22e-08;1!UBERON:0002135;8.98e-08;1!UBERON:0001301;8.98e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.95e-18,6;UBERON:0002358,4.95e-18,6;UBERON:0003684,4.95e-18,6;UBERON:0001178,4.95e-18,6;UBERON:0004457,1.13e-13,12;UBERON:0000042,1.13e-13,12;UBERON:0007100,1.03e-11,27;UBERON:0000310,5.12e-11,10;UBERON:0004151,2.01e-10,3;UBERON:0007023,2.21e-10,114;UBERON:0001443,5.00e-10,11;UBERON:0003978,8.97e-10,3;UBERON:0009751,8.97e-10,3;UBERON:0000946,8.97e-10,3;UBERON:0002523,8.97e-10,3;UBERON:0005983,8.97e-10,3;UBERON:0002165,8.97e-10,3;UBERON:0002062,8.97e-10,3;UBERON:0007280,8.97e-10,3;UBERON:0002084,1.65e-08,1;UBERON:0002082,1.65e-08,1;UBERON:0010226,1.65e-08,1;UBERON:0002079,2.19e-08,1;UBERON:0002146,3.11e-08,1;UBERON:0005623,3.11e-08,1;UBERON:0000989,4.71e-08,1;UBERON:0008811,4.71e-08,1;UBERON:0006258,4.71e-08,1;UBERON:0005876,4.71e-08,1;UBERON:0004874,4.71e-08,1;UBERON:0001301,9.29e-08,1;UBERON:0002135,1.14e-07,1 | |||
|phase1_expression=6.35874327446948,3.42560838225573,1.9733616573436,4.00293193412522,0.893922188854576,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.289693037921647,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0,0,0.558350568994769,0,0.876933046450788,0,0.368199594569197,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2254015016441,0.153461973288062,1.12264037773229,2.17836553734692,2.04682899626681,0.804269605718038,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.366277859273374,0.41254749960294,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,1.68886108238131,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07667176470977,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,1.83309043480088,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,3.20063754411784,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,3.66656678418694,0,4.19325901047881,12.4475553959606,7.36465809558179,0.940568614814168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0.0524545881349981,0,0,0,7.14695326373367,23.8353109331555,0,0.542999601753713,0,0.653174720218818,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0.544017803369474,0.5013797880454,0.919036730290385,0.327872630709804,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697852591396,2.69399591012735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.526472298444801,0,0,0,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,19.1979448821182,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.833565680400634,0,0,0,2.13233981900981,0,0,0,0,0.12729431655633,0.202117188958219,2.39488422686657,0.342233301085281,0.0673520530145875,0.573777643141411,0,0,0,0,0,4.69281884806909,0.366724332548599,0,0,0.201273793591026,0 | |phase1_expression=6.35874327446948,3.42560838225573,1.9733616573436,4.00293193412522,0.893922188854576,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.289693037921647,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0,0,0.558350568994769,0,0.876933046450788,0,0.368199594569197,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2254015016441,0.153461973288062,1.12264037773229,2.17836553734692,2.04682899626681,0.804269605718038,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.366277859273374,0.41254749960294,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,1.68886108238131,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07667176470977,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,1.83309043480088,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,3.20063754411784,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,3.66656678418694,0,4.19325901047881,12.4475553959606,7.36465809558179,0.940568614814168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0.0524545881349981,0,0,0,7.14695326373367,23.8353109331555,0,0.542999601753713,0,0.653174720218818,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0.544017803369474,0.5013797880454,0.919036730290385,0.327872630709804,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697852591396,2.69399591012735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.526472298444801,0,0,0,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,19.1979448821182,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.833565680400634,0,0,0,2.13233981900981,0,0,0,0,0.12729431655633,0.202117188958219,2.39488422686657,0.342233301085281,0.0673520530145875,0.573777643141411,0,0,0,0,0,4.69281884806909,0.366724332548599,0,0,0.201273793591026,0 | ||
|short_description=p@chr1:16341491..16341518,- | |||
}} | }} |
Latest revision as of 23:49, 27 July 2015
Short description: | p@chr1:16341491..16341518, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:16341491..16341518, - |
Coexpression cluster: | C410_skeletal_left_heart_penis_diaphragm_throat_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.03e-15 | 15 |
adipocyte of breast | 7.40e-15 | 2 |
adipocyte of omentum tissue | 6.00e-10 | 3 |
omentum preadipocyte | 8.58e-10 | 3 |
preadipocyte of the breast | 9.38e-10 | 3 |
preadipocyte | 5.25e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.95e-18 | 6 |
peritoneum | 4.95e-18 | 6 |
abdominal cavity | 4.95e-18 | 6 |
visceral peritoneum | 4.95e-18 | 6 |
cavity lining | 1.13e-13 | 12 |
serous membrane | 1.13e-13 | 12 |
primary circulatory organ | 1.03e-11 | 27 |
breast | 5.12e-11 | 10 |
cardiac chamber | 2.01e-10 | 3 |
adult organism | 2.21e-10 | 114 |
chest | 5.00e-10 | 11 |
valve | 8.97e-10 | 3 |
cardiac mesenchyme | 8.97e-10 | 3 |
cardial valve | 8.97e-10 | 3 |
tunica intima | 8.97e-10 | 3 |
heart layer | 8.97e-10 | 3 |
endocardium | 8.97e-10 | 3 |
endocardial cushion | 8.97e-10 | 3 |
presumptive endocardium | 8.97e-10 | 3 |
heart left ventricle | 1.65e-08 | 1 |
cardiac ventricle | 1.65e-08 | 1 |
future cardiac ventricle | 1.65e-08 | 1 |
left cardiac atrium | 2.19e-08 | 1 |
pulmonary valve | 3.11e-08 | 1 |
semi-lunar valve | 3.11e-08 | 1 |
penis | 4.71e-08 | 1 |
intromittent organ | 4.71e-08 | 1 |
lateral plate mesenchyme | 4.71e-08 | 1 |
undifferentiated genital tubercle | 4.71e-08 | 1 |
somatopleure | 4.71e-08 | 1 |
epididymis | 9.29e-08 | 1 |
mitral valve | 1.14e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.89e-15 | 2 |
vascular disease | 2.71e-08 | 1 |
ischemia | 2.71e-08 | 1 |
extrinsic cardiomyopathy | 2.71e-08 | 1 |
myocardial ischemia | 2.71e-08 | 1 |
myocardial infarction | 2.71e-08 | 1 |
cardiovascular system disease | 6.00e-08 | 4 |