FFCP PHASE1:Hg19::chr1:161676969..161676980,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=84824 | |EntrezGene=entrezgene:84824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=18504 | |HGNC=HGNC:18504 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q5VXB1 | |UniProt=uniprot:Q5VXB1 | ||
|association_with_transcript=-18bp_to_ENST00000367957_5end | |association_with_transcript=-18bp_to_ENST00000367957_5end | ||
|cluster_id=chr1:161676969..161676980,+ | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_5_at_FCRLA_5end | |description=CAGE_peak_5_at_FCRLA_5end |
Revision as of 23:40, 27 July 2015
Short description: | p5@FCRLA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FCRLA_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -18bp_to_ENST00000367957_5end |
EntrezGene: | 84824 |
HGNC: | 18504 |
UniProt: | Q5VXB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@FCRLA |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.03e-47 | 24 |
pro-B cell | 2.03e-47 | 24 |
melanocyte | 7.34e-36 | 10 |
melanoblast | 7.34e-36 | 10 |
pigment cell | 2.12e-25 | 14 |
B cell | 5.64e-24 | 14 |
lymphocyte | 1.78e-23 | 53 |
common lymphoid progenitor | 1.78e-23 | 53 |
light melanocyte | 2.89e-23 | 3 |
lymphoid lineage restricted progenitor cell | 1.28e-20 | 52 |
Showing 1 to 10 of 28 entries
Ontology term | p-value | n |
---|---|---|
skin epidermis | 9.42e-08 | 15 |
outer epithelium | 9.42e-08 | 15 |
enveloping layer of ectoderm | 9.42e-08 | 15 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
melanoma | 1.16e-15 | 2 |
lymphoma | 8.39e-12 | 10 |
genetic disease | 1.02e-08 | 1 |
monogenic disease | 1.02e-08 | 1 |
xeroderma pigmentosum | 1.02e-08 | 1 |
lymphatic system cancer | 1.71e-08 | 1 |
lymphosarcoma | 1.71e-08 | 1 |
acute leukemia | 3.79e-08 | 1 |
Showing 1 to 8 of 8 entries