FFCP PHASE1:Hg19::chr1:160588275..160588284,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:160588275..160588284,- | |||
|coexpression_cluster_id=C1715 | |||
|description=CAGE_peak_at_chr1:160588275..160588284,- | |description=CAGE_peak_at_chr1:160588275..160588284,- | ||
|id=chr1:160588275..160588284,- | |id=chr1:160588275..160588284,- | ||
|ontology_enrichment_celltype=CL:0000838!9.41e-32!52;CL:0000542!5.12e-31!53;CL:0000051!5.12e-31!53;CL:0002087!1.86e-23!119;CL:0002031!9.84e-21!124;CL:0000738!7.37e-20!140;CL:0000988!2.60e-16!182;CL:0000945!5.52e-16!24;CL:0000826!5.52e-16!24;CL:0000037!2.07e-14!172;CL:0000566!2.07e-14!172;CL:0000084!4.23e-14!25;CL:0000827!4.23e-14!25;CL:0002032!2.35e-13!165;CL:0000837!2.35e-13!165;CL:0000624!1.17e-11!6;CL:0000791!6.73e-09!18;CL:0000789!6.73e-09!18;CL:0002420!6.73e-09!18;CL:0002419!6.73e-09!18;CL:0000790!6.73e-09!18;CL:0000080!3.23e-08!6 | |ontology_enrichment_celltype=CL:0000838!9.41e-32!52;CL:0000542!5.12e-31!53;CL:0000051!5.12e-31!53;CL:0002087!1.86e-23!119;CL:0002031!9.84e-21!124;CL:0000738!7.37e-20!140;CL:0000988!2.60e-16!182;CL:0000945!5.52e-16!24;CL:0000826!5.52e-16!24;CL:0000037!2.07e-14!172;CL:0000566!2.07e-14!172;CL:0000084!4.23e-14!25;CL:0000827!4.23e-14!25;CL:0002032!2.35e-13!165;CL:0000837!2.35e-13!165;CL:0000624!1.17e-11!6;CL:0000791!6.73e-09!18;CL:0000789!6.73e-09!18;CL:0002420!6.73e-09!18;CL:0002419!6.73e-09!18;CL:0000790!6.73e-09!18;CL:0000080!3.23e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.51e-14;24!CL:0000946;3.28e-11;1!CL:0000786;3.28e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.22e-14,24;CL:0000826,1.22e-14,24;CL:0000946,3.28e-11,1;CL:0000786,3.28e-11,1;CL:0000980,3.28e-11,1;CL:0000838,8.66e-09,52;CL:0000542,1.31e-08,53;CL:0000051,1.31e-08,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!3.48e-10!10 | |ontology_enrichment_disease=DOID:0060058!3.48e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:630;3.28e-11;1!DOID:0050177;3.28e-11;1!DOID:0050427;3.28e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.68e-11,1;DOID:0050177,2.68e-11,1;DOID:0050427,2.68e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002370!3.33e-07!4;UBERON:0005058!3.33e-07!4;UBERON:0009113!3.33e-07!4;UBERON:0003295!3.33e-07!4;UBERON:0005562!3.33e-07!4;UBERON:0004177!4.08e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;5.71e-09;5!UBERON:0005057;5.71e-09;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9801228241701,1.80621296789881,1.73163718890094,0,0,0,0,0,0,0.0774672005803016,0.568676929949686,0,0.553995408531877,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0.569212969109448,0.587237189370939,0,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0.334372990781356,0.32592226663359,0,1.94826728407911,0.779873198196215,0,0.221533894583621,1.35401931882508,4.22701355094728,5.20237390239513,5.26201294731764,1.93445012450094,0.869409257205157,0.444859689486181,0.535081656179426,0,1.24640276967323,0.383220493601921,0,1.26509846009751,0,0,0.950452044448374,0,0.127986611154418,0,0.710331756132051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,2.33861130376032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,0.617819694732514,0.730953646538188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02520268501629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38280785066935,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,2.79835236589801,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.322944549180031,1.05527014302958,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.402547587182052,1.60284246151616 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9801228241701,1.80621296789881,1.73163718890094,0,0,0,0,0,0,0.0774672005803016,0.568676929949686,0,0.553995408531877,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0.569212969109448,0.587237189370939,0,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0.334372990781356,0.32592226663359,0,1.94826728407911,0.779873198196215,0,0.221533894583621,1.35401931882508,4.22701355094728,5.20237390239513,5.26201294731764,1.93445012450094,0.869409257205157,0.444859689486181,0.535081656179426,0,1.24640276967323,0.383220493601921,0,1.26509846009751,0,0,0.950452044448374,0,0.127986611154418,0,0.710331756132051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,2.33861130376032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,0.617819694732514,0.730953646538188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02520268501629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38280785066935,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,2.79835236589801,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.322944549180031,1.05527014302958,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.402547587182052,1.60284246151616 | ||
|short_description=p@chr1:160588275..160588284,- | |short_description=p@chr1:160588275..160588284,- | ||
}} | }} |
Latest revision as of 23:22, 27 July 2015
Short description: | p@chr1:160588275..160588284, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:160588275..160588284, - |
Coexpression cluster: | C1715_CD4_xeroderma_B_splenic_thymus_b_non |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.22e-14 | 24 |
pro-B cell | 1.22e-14 | 24 |
antibody secreting cell | 3.28e-11 | 1 |
plasma cell | 3.28e-11 | 1 |
plasmablast | 3.28e-11 | 1 |
lymphoid lineage restricted progenitor cell | 8.66e-09 | 52 |
lymphocyte | 1.31e-08 | 53 |
common lymphoid progenitor | 1.31e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.68e-11 | 1 |
monogenic disease | 2.68e-11 | 1 |
xeroderma pigmentosum | 2.68e-11 | 1 |