FFCP PHASE1:Hg19::chr1:159946541..159946553,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:159946541..159946553,+ | |||
|description=CAGE_peak_at_chr1:159946541..159946553,+ | |description=CAGE_peak_at_chr1:159946541..159946553,+ | ||
|id=chr1:159946541..159946553,+ | |id=chr1:159946541..159946553,+ | ||
|ontology_enrichment_celltype=CL:0000077!1.08e-09!19;CL:0000057!7.45e-08!75 | |ontology_enrichment_celltype=CL:0000077!1.08e-09!19;CL:0000057!7.45e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0000077;5.11e-17;19!CL:0000511;2.87e-08;1!CL:0002625;2.87e-08;1!CL:0000216;2.87e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,5.84e-17,19;CL:0000511,1.63e-08,1;CL:0002625,1.63e-08,1;CL:0000216,1.63e-08,1;CL:0000076,1.64e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3369;2.87e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,1.22e-08,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.87e-08;1!UBERON:0001343;2.87e-08;1!UBERON:0004910;2.87e-08;1!UBERON:0004813;2.87e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.63e-08,1;UBERON:0001343,1.63e-08,1;UBERON:0004910,1.63e-08,1;UBERON:0005154,1.63e-08,1;UBERON:0005295,1.63e-08,1;UBERON:0004813,1.63e-08,1;UBERON:0005297,1.63e-08,1;UBERON:0005294,1.63e-08,1;UBERON:0010141,1.63e-08,1;UBERON:0005891,1.63e-08,1 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,1.30361867064741,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.633152558322899,0.132409180813219,0.286836620748814,1.41867352879343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0.635795703478686,0,0.103052529238439,0,0.18611685633159,0,0.194874010322397,0.504867548488229,0.0920498986422993,0.323292113637624,0,0.10075209822764,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,1.91005047582099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,1.99945982364114,0,0,0,0.479249710983165,0,0,0.579125226670317,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,1.60586089917446,1.89242898040722,0.234282829985426,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,1.40330047216537,0.384417447767103,0.511707249066704,1.93024705372329,0,0,0,0,0,0.116210378459959,0.120859449591622,0,4.78821142466661,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0,0,0,0,0,0,0,0,0.650060246036521,1.6068392984416,0,0,0,0,0,0,0,0.0890320356467374,1.32227932288782,0.192190067365106,0.255225424989168,1.2138933702666,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.848432591722276,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0.633322905892992,2.96365403663912,0,0,0.384888450902048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,1.23087398947712,0.270455678475983,0,0,0.18714054040822,0,0,0,0,0,0,0.921482106297696,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,1.17330829640882,0,0.213452994739353,0.19980960958213,0,0,0,0.288109595976299,0,0.235694034616795,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,1.23138781124008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,1.10961172300523,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0,0,0.414706207840855,0,0.521745061811734,0.450772826991655,1.14241563650639,0.813741466409323,0,0,0,0.398095888698616,0,0.343395705182793,1.34699795506368,0,0.192619830407303,1.07220795687463,0,1.36023555307363,0.463044948647668,0.244736704506468,0,1.54400723580486,0.438568099157414,1.06013487567529,0,1.01365464391844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0.207216164163037,0.6828739083758,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0.874238242015829,0,0,0,0,0,0,0.679708458751268,0,0,0,1.42843150884526,0,0,0,0,0,0,0,0,1.0580536810308,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.952257725854961,0,0,0,0,0.202117188958219,0.653150243690884,0.342233301085281,0,0,0,0,0,0,0.0898252021065869,0,0,0.406896178315738,0,0.201273793591026,0 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|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,1.30361867064741,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.633152558322899,0.132409180813219,0.286836620748814,1.41867352879343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0.635795703478686,0,0.103052529238439,0,0.18611685633159,0,0.194874010322397,0.504867548488229,0.0920498986422993,0.323292113637624,0,0.10075209822764,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,1.91005047582099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,1.99945982364114,0,0,0,0.479249710983165,0,0,0.579125226670317,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,1.60586089917446,1.89242898040722,0.234282829985426,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,1.40330047216537,0.384417447767103,0.511707249066704,1.93024705372329,0,0,0,0,0,0.116210378459959,0.120859449591622,0,4.78821142466661,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0,0,0,0,0,0,0,0,0.650060246036521,1.6068392984416,0,0,0,0,0,0,0,0.0890320356467374,1.32227932288782,0.192190067365106,0.255225424989168,1.2138933702666,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.848432591722276,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0.633322905892992,2.96365403663912,0,0,0.384888450902048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,1.23087398947712,0.270455678475983,0,0,0.18714054040822,0,0,0,0,0,0,0.921482106297696,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,1.17330829640882,0,0.213452994739353,0.19980960958213,0,0,0,0.288109595976299,0,0.235694034616795,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,1.23138781124008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,1.10961172300523,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0,0,0.414706207840855,0,0.521745061811734,0.450772826991655,1.14241563650639,0.813741466409323,0,0,0,0.398095888698616,0,0.343395705182793,1.34699795506368,0,0.192619830407303,1.07220795687463,0,1.36023555307363,0.463044948647668,0.244736704506468,0,1.54400723580486,0.438568099157414,1.06013487567529,0,1.01365464391844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0.207216164163037,0.6828739083758,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0.874238242015829,0,0,0,0,0,0,0.679708458751268,0,0,0,1.42843150884526,0,0,0,0,0,0,0,0,1.0580536810308,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.952257725854961,0,0,0,0,0.202117188958219,0.653150243690884,0.342233301085281,0,0,0,0,0,0,0.0898252021065869,0,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p@chr1:159946541..159946553,+ | |short_description=p@chr1:159946541..159946553,+ | ||
}} | }} |
Latest revision as of 23:11, 27 July 2015
Short description: | p@chr1:159946541..159946553, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:159946541..159946553, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 5.84e-17 | 19 |
androgen binding protein secreting cell | 1.63e-08 | 1 |
seminiferous tubule epithelial cell | 1.63e-08 | 1 |
Sertoli cell | 1.63e-08 | 1 |
squamous epithelial cell | 1.64e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.63e-08 | 1 |
seminiferous tubule of testis | 1.63e-08 | 1 |
epithelium of male gonad | 1.63e-08 | 1 |
epithelial cord | 1.63e-08 | 1 |
sex cord | 1.63e-08 | 1 |
seminiferous tubule epithelium | 1.63e-08 | 1 |
testis sex cord | 1.63e-08 | 1 |
genital ridge | 1.63e-08 | 1 |
primitive sex cord of indifferent gonad | 1.63e-08 | 1 |
coelomic epithelium | 1.63e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 1.22e-08 | 1 |