FFCP PHASE1:Hg19::chr1:155804376..155804383,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:155804376..155804383,- | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_at_chr1:155804376..155804383,- | |||
|id=chr1:155804376..155804383,- | |||
|ontology_enrichment_celltype=CL:0002322!5.31e-42!5;CL:0000039!3.58e-31!7;CL:0000586!3.58e-31!7;CL:0000075!5.62e-08!27 | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.01e-90;7!CL:0000586;7.01e-90;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.02e-90,7;CL:0000586,7.02e-90,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.97e-63;10!UBERON:0005564;2.97e-63;10 | |||
|ontology_enrichment_disease=DOID:3095!2.14e-15!22;DOID:2994!2.14e-15!22;DOID:1036!1.49e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.09e-45;22!DOID:2994;3.09e-45;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.09e-45,22;DOID:2994,3.09e-45,22;DOID:305,5.66e-10,106;DOID:0050687,1.55e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.49e-27!8;UBERON:0003135!5.54e-20!11;UBERON:0000991!1.32e-10!21;UBERON:0009196!1.32e-10!21;UBERON:0009117!1.32e-10!21;UBERON:0005564!1.32e-10!21;UBERON:0004176!3.91e-10!22;UBERON:0003101!3.91e-10!22;UBERON:0000079!3.91e-10!22;UBERON:0001897!5.02e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.66e-79;8!UBERON:0003135;1.34e-57;11!UBERON:0000991;1.22e-30;21!UBERON:0003101;2.73e-29;22!UBERON:0000079;2.73e-29;22!UBERON:0002323;1.01e-13;45!UBERON:0003133;2.81e-11;44!UBERON:0000922;6.71e-11;49!UBERON:0002553;5.69e-09;52!UBERON:0004458;8.16e-08;48!UBERON:0005156;2.11e-07;59!UBERON:0000990;2.11e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.66e-79,8;UBERON:0003135,1.34e-57,11;UBERON:0000991,1.22e-30,21;UBERON:0009196,1.22e-30,21;UBERON:0009117,1.22e-30,21;UBERON:0005564,1.22e-30,21;UBERON:0004176,2.73e-29,22;UBERON:0003101,2.73e-29,22;UBERON:0000079,2.73e-29,22;UBERON:0002323,1.96e-14,46;UBERON:0003133,7.29e-14,48;UBERON:0004458,1.35e-13,49;UBERON:0003886,2.11e-12,54;UBERON:0005156,2.07e-11,59;UBERON:0000990,2.07e-11,59;UBERON:0002553,4.65e-11,61 | |||
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|short_description=p@chr1:155804376..155804383,- | |||
}} | }} | ||
Latest revision as of 22:20, 27 July 2015
| Short description: | p@chr1:155804376..155804383, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr1:155804376..155804383, - |
| Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| germ line cell | 7.02e-90 | 7 |
| germ cell | 7.02e-90 | 7 |
| Ontology term | p-value | n |
|---|---|---|
| testis | 8.66e-79 | 8 |
| male reproductive organ | 1.34e-57 | 11 |
| gonad | 1.22e-30 | 21 |
| indifferent external genitalia | 1.22e-30 | 21 |
| indifferent gonad | 1.22e-30 | 21 |
| gonad primordium | 1.22e-30 | 21 |
| external genitalia | 2.73e-29 | 22 |
| male organism | 2.73e-29 | 22 |
| male reproductive system | 2.73e-29 | 22 |
| body cavity | 1.96e-14 | 46 |
| reproductive organ | 7.29e-14 | 48 |
| body cavity or lining | 1.35e-13 | 49 |
| body cavity precursor | 2.11e-12 | 54 |
| reproductive structure | 2.07e-11 | 59 |
| reproductive system | 2.07e-11 | 59 |
| anatomical cavity | 4.65e-11 | 61 |
| Ontology term | p-value | n |
|---|---|---|
| germ cell and embryonal cancer | 3.09e-45 | 22 |
| germ cell cancer | 3.09e-45 | 22 |
| carcinoma | 5.66e-10 | 106 |
| cell type cancer | 1.55e-07 | 143 |