FFCP PHASE1:Hg19::chr1:153917876..153917889,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:153917876..153917889,+ | |||
|coexpression_cluster_id=C2066 | |||
|description=CAGE_peak_at_chr1:153917876..153917889,+ | |description=CAGE_peak_at_chr1:153917876..153917889,+ | ||
|id=chr1:153917876..153917889,+ | |id=chr1:153917876..153917889,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.20e-88!140;CL:0000037!6.61e-85!172;CL:0000566!6.61e-85!172;CL:0002032!1.53e-79!165;CL:0000837!1.53e-79!165;CL:0000988!1.84e-78!182;CL:0002031!1.96e-72!124;CL:0002087!2.56e-69!119;CL:0000766!1.16e-67!76;CL:0000763!1.24e-60!112;CL:0000049!1.24e-60!112;CL:0002057!5.47e-59!42;CL:0000557!1.08e-57!71;CL:0000860!5.27e-54!45;CL:0000839!7.68e-54!70;CL:0002009!2.11e-53!65;CL:0002194!1.27e-50!63;CL:0000576!1.27e-50!63;CL:0000040!1.27e-50!63;CL:0000559!1.27e-50!63;CL:0000134!3.37e-27!358;CL:0002320!4.60e-26!365;CL:0000219!4.44e-22!390;CL:0000048!1.57e-18!430;CL:0000034!3.27e-18!444;CL:0000723!7.65e-18!436;CL:0000838!2.62e-16!52;CL:0000542!7.87e-16!53;CL:0000051!7.87e-16!53;CL:0002393!3.57e-15!9;CL:0002397!3.57e-15!9;CL:0000094!5.67e-13!8;CL:0000791!1.64e-09!18;CL:0000789!1.64e-09!18;CL:0002420!1.64e-09!18;CL:0002419!1.64e-09!18;CL:0000790!1.64e-09!18;CL:0000081!7.05e-09!11;CL:0000624!1.01e-08!6;CL:0000084!3.91e-08!25;CL:0000827!3.91e-08!25 | |ontology_enrichment_celltype=CL:0000738!3.20e-88!140;CL:0000037!6.61e-85!172;CL:0000566!6.61e-85!172;CL:0002032!1.53e-79!165;CL:0000837!1.53e-79!165;CL:0000988!1.84e-78!182;CL:0002031!1.96e-72!124;CL:0002087!2.56e-69!119;CL:0000766!1.16e-67!76;CL:0000763!1.24e-60!112;CL:0000049!1.24e-60!112;CL:0002057!5.47e-59!42;CL:0000557!1.08e-57!71;CL:0000860!5.27e-54!45;CL:0000839!7.68e-54!70;CL:0002009!2.11e-53!65;CL:0002194!1.27e-50!63;CL:0000576!1.27e-50!63;CL:0000040!1.27e-50!63;CL:0000559!1.27e-50!63;CL:0000134!3.37e-27!358;CL:0002320!4.60e-26!365;CL:0000219!4.44e-22!390;CL:0000048!1.57e-18!430;CL:0000034!3.27e-18!444;CL:0000723!7.65e-18!436;CL:0000838!2.62e-16!52;CL:0000542!7.87e-16!53;CL:0000051!7.87e-16!53;CL:0002393!3.57e-15!9;CL:0002397!3.57e-15!9;CL:0000094!5.67e-13!8;CL:0000791!1.64e-09!18;CL:0000789!1.64e-09!18;CL:0002420!1.64e-09!18;CL:0002419!1.64e-09!18;CL:0000790!1.64e-09!18;CL:0000081!7.05e-09!11;CL:0000624!1.01e-08!6;CL:0000084!3.91e-08!25;CL:0000827!3.91e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.13e-61;33!CL:0002057;7.13e-61;33!CL:0000576;5.53e-50;48!CL:0000473;3.34e-46;39!CL:0000234;3.34e-46;39!CL:0000766;1.11e-39;69!CL:0000094;9.46e-24;8!CL:0002087;1.54e-19;104!CL:0002393;2.23e-19;6!CL:0002397;2.23e-19;6!CL:0000763;1.11e-17;100!CL:0000738;1.74e-17;136!CL:0000081;7.12e-17;11!CL:0000988;1.21e-11;177!CL:0000623;5.53e-11;3!CL:0000875;1.82e-10;3!CL:0002396;1.82e-10;3!CL:0000226;2.13e-10;3!CL:0000842;2.13e-10;3!CL:0000767;1.07e-09;3!CL:0000775;1.24e-09;3!CL:0000219;3.06e-08;193!CL:0000771;7.37e-08;2!CL:0001014;4.05e-07;2!CL:0001016;4.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.56e-95,42;CL:0002057,7.56e-95,42;CL:0000766,3.48e-88,72;CL:0000473,4.09e-86,48;CL:0000234,4.09e-86,48;CL:0000738,2.56e-81,136;CL:0002009,1.94e-75,61;CL:0000557,2.97e-71,67;CL:0002194,2.37e-70,59;CL:0000576,2.37e-70,59;CL:0000040,2.37e-70,59;CL:0000559,2.37e-70,59;CL:0000839,3.34e-65,66;CL:0002087,2.51e-64,115;CL:0000037,2.60e-63,168;CL:0002031,9.50e-61,120;CL:0000763,2.32e-60,108;CL:0000049,2.32e-60,108;CL:0000988,2.06e-59,177;CL:0002032,2.76e-59,161;CL:0000837,2.76e-59,161;CL:0002393,3.12e-28,9;CL:0002397,3.12e-28,9;CL:0000094,6.61e-24,8;CL:0000134,8.05e-23,354;CL:0002320,4.17e-22,361;CL:0000219,1.37e-19,386;CL:0000081,5.52e-17,11;CL:0000048,1.64e-16,427;CL:0000723,4.36e-16,433;CL:0000034,1.54e-15,441;CL:0000623,5.46e-11,3;CL:0000825,5.46e-11,3;CL:0000875,1.89e-10,3;CL:0002396,1.89e-10,3;CL:0000226,2.35e-10,3;CL:0000842,2.35e-10,3;CL:0000775,9.33e-10,3;CL:0000767,9.62e-10,3;CL:0000771,7.62e-08,2;CL:0001014,4.45e-07,2;CL:0001016,4.45e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;9.65e-68;42!CL:0000049;5.74e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.70e-51!102;UBERON:0003061!2.70e-51!102;UBERON:0002371!4.68e-51!80;UBERON:0002193!3.31e-46!112;UBERON:0001474!3.91e-46!86;UBERON:0004765!8.34e-38!101;UBERON:0001434!8.34e-38!101;UBERON:0002405!1.19e-34!115;UBERON:0002384!1.62e-24!375;UBERON:0002204!2.72e-16!167;UBERON:0003081!3.18e-15!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.30e-61,76;UBERON:0002390,2.32e-61,98;UBERON:0003061,2.32e-61,98;UBERON:0001474,2.40e-56,82;UBERON:0002193,1.31e-54,108;UBERON:0002405,5.74e-51,93;UBERON:0004765,2.08e-50,90;UBERON:0001434,2.60e-44,100;UBERON:0003081,1.59e-23,203;UBERON:0002204,3.00e-22,167;UBERON:0002384,3.93e-21,371;UBERON:0000926,5.03e-11,315;UBERON:0004120,5.03e-11,315;UBERON:0006603,5.03e-11,315 | |||
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|short_description=p@chr1:153917876..153917889,+ | |short_description=p@chr1:153917876..153917889,+ | ||
}} | }} |
Latest revision as of 21:53, 27 July 2015
Short description: | p@chr1:153917876..153917889, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:153917876..153917889, + |
Coexpression cluster: | C2066_CD14_Eosinophils_Natural_CD14CD16_immature_CD4_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.30e-61 | 76 |
hematopoietic system | 2.32e-61 | 98 |
blood island | 2.32e-61 | 98 |
bone element | 2.40e-56 | 82 |
hemolymphoid system | 1.31e-54 | 108 |
immune system | 5.74e-51 | 93 |
skeletal element | 2.08e-50 | 90 |
skeletal system | 2.60e-44 | 100 |
lateral plate mesoderm | 1.59e-23 | 203 |
musculoskeletal system | 3.00e-22 | 167 |
connective tissue | 3.93e-21 | 371 |
mesoderm | 5.03e-11 | 315 |
mesoderm-derived structure | 5.03e-11 | 315 |
presumptive mesoderm | 5.03e-11 | 315 |