FFCP PHASE1:Hg19::chr1:152842532..152842539,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:152842532..152842539,+ | |||
|coexpression_cluster_id=C1250 | |coexpression_cluster_id=C1250 | ||
|description=CAGE_peak_at_chr1:152842532..152842539,+ | |description=CAGE_peak_at_chr1:152842532..152842539,+ | ||
|id=chr1:152842532..152842539,+ | |id=chr1:152842532..152842539,+ | ||
|ontology_enrichment_celltype=CL:0002574!3.17e-15!1;CL:0000243!3.82e-08!15;CL:0000125!3.82e-08!15;CL:0000030!3.82e-08!15;CL:0000339!3.82e-08!15;CL:0000095!2.43e-07!17;CL:0000123!2.43e-07!17 | |ontology_enrichment_celltype=CL:0002574!3.17e-15!1;CL:0000243!3.82e-08!15;CL:0000125!3.82e-08!15;CL:0000030!3.82e-08!15;CL:0000339!3.82e-08!15;CL:0000095!2.43e-07!17;CL:0000123!2.43e-07!17 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.00e-40;10!UBERON:0006603;4.47e-07;65 | |||
|ontology_enrichment_disease=DOID:0060084!2.05e-20!3;DOID:127!2.05e-20!3;DOID:3112!9.99e-16!1;DOID:0060072!1.44e-15!4 | |ontology_enrichment_disease=DOID:0060084!2.05e-20!3;DOID:127!2.05e-20!3;DOID:3112!9.99e-16!1;DOID:0060072!1.44e-15!4 | ||
|ontology_enrichment_disease_v019=DOID:0060084;8.98e-131;3!DOID:127;8.98e-131;3!DOID:0060072;1.55e-98;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.98e-131,3;DOID:127,8.98e-131,3;DOID:0060072,1.55e-98,4 | |||
|ontology_enrichment_uberon=UBERON:0002046!1.69e-12!5;UBERON:0004117!1.69e-12!5;UBERON:0007689!1.69e-12!5;UBERON:0007123!1.69e-12!5;UBERON:0003091!1.69e-12!5;UBERON:0002037!2.09e-10!6;UBERON:0006215!2.09e-10!6;UBERON:0002680!3.14e-07!9;UBERON:0001895!3.14e-07!9;UBERON:0010092!3.14e-07!9 | |ontology_enrichment_uberon=UBERON:0002046!1.69e-12!5;UBERON:0004117!1.69e-12!5;UBERON:0007689!1.69e-12!5;UBERON:0007123!1.69e-12!5;UBERON:0003091!1.69e-12!5;UBERON:0002037!2.09e-10!6;UBERON:0006215!2.09e-10!6;UBERON:0002680!3.14e-07!9;UBERON:0001895!3.14e-07!9;UBERON:0010092!3.14e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000995;2.07e-24;17!UBERON:0003975;3.88e-23;18!UBERON:0004175;4.86e-20;21!UBERON:0003134;1.77e-12;33!UBERON:0000474;1.70e-11;37!UBERON:0003133;3.81e-10;44!UBERON:0003100;7.90e-07;41!UBERON:0005156;7.98e-07;59!UBERON:0000990;7.98e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000995,4.86e-20,21;UBERON:0005795,3.41e-19,22;UBERON:0003975,3.41e-19,22;UBERON:0004175,4.64e-17,25;UBERON:0003134,5.76e-12,37;UBERON:0000474,5.76e-12,37;UBERON:0003100,6.32e-11,41;UBERON:0003133,1.62e-09,48;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59 | |||
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|short_description=p@chr1:152842532..152842539,+ | |short_description=p@chr1:152842532..152842539,+ | ||
}} | }} |
Latest revision as of 21:36, 27 July 2015
Short description: | p@chr1:152842532..152842539, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:152842532..152842539, + |
Coexpression cluster: | C1250_leiomyoma_Mesenchymal_Olfactory_amygdala_carcinoid_fibrosarcoma_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus | 4.86e-20 | 21 |
embryonic uterus | 3.41e-19 | 22 |
internal female genitalia | 3.41e-19 | 22 |
internal genitalia | 4.64e-17 | 25 |
female reproductive organ | 5.76e-12 | 37 |
female reproductive system | 5.76e-12 | 37 |
female organism | 6.32e-11 | 41 |
reproductive organ | 1.62e-09 | 48 |
reproductive structure | 5.66e-08 | 59 |
reproductive system | 5.66e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.98e-131 | 3 |
leiomyoma | 8.98e-131 | 3 |
benign neoplasm | 1.55e-98 | 4 |