FFCP PHASE1:Hg19::chr1:152084264..152084306,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:152084264..152084306,- | |||
|description=CAGE_peak_at_chr1:152084264..152084306,- | |description=CAGE_peak_at_chr1:152084264..152084306,- | ||
|id=chr1:152084264..152084306,- | |id=chr1:152084264..152084306,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.44e-09;2!CL:0000242;1.44e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.57e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.16e-18;1!UBERON:0003124;3.16e-18;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4074;1.44e-09;2!DOID:4905;1.44e-09;2!DOID:154;1.44e-09;2!DOID:4236;1.44e-09;2!DOID:3498;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.12e-09,2;DOID:4236,1.12e-09,2;DOID:4074,1.33e-09,2;DOID:4905,1.33e-09,2;DOID:3498,1.33e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002020!6.94e-21!34;UBERON:0003528!6.94e-21!34;UBERON:0001893!1.45e-20!34;UBERON:0001869!2.88e-20!32;UBERON:0001049!2.49e-19!57;UBERON:0005068!2.49e-19!57;UBERON:0006241!2.49e-19!57;UBERON:0007135!2.49e-19!57;UBERON:0002791!2.86e-19!33;UBERON:0002780!1.01e-17!41;UBERON:0001890!1.01e-17!41;UBERON:0006240!1.01e-17!41;UBERON:0003080!3.80e-17!42;UBERON:0002616!6.37e-17!59;UBERON:0003075!5.22e-16!86;UBERON:0007284!5.22e-16!86;UBERON:0002619!3.35e-15!22;UBERON:0001017!7.20e-15!82;UBERON:0002346!7.28e-15!90;UBERON:0005743!7.72e-15!86;UBERON:0000073!1.32e-14!94;UBERON:0001016!1.32e-14!94;UBERON:0001950!1.33e-14!20;UBERON:0000955!2.91e-14!69;UBERON:0006238!2.91e-14!69;UBERON:0000956!5.88e-13!25;UBERON:0000203!5.88e-13!25;UBERON:0007023!6.14e-13!115;UBERON:0003056!6.21e-12!61;UBERON:0002420!4.62e-10!9;UBERON:0007245!4.62e-10!9;UBERON:0010009!4.62e-10!9;UBERON:0010011!4.62e-10!9;UBERON:0000454!4.62e-10!9;UBERON:0002308!5.17e-10!9;UBERON:0000125!5.17e-10!9;UBERON:0004121!9.53e-10!169;UBERON:0000924!2.89e-09!173;UBERON:0006601!2.89e-09!173;UBERON:0000033!4.47e-09!123;UBERON:0000153!7.25e-09!129;UBERON:0007811!7.25e-09!129;UBERON:0000369!1.21e-08!4;UBERON:0002435!1.21e-08!4;UBERON:0000204!1.21e-08!4;UBERON:0010082!1.21e-08!4;UBERON:0005383!4.95e-07!3;UBERON:0005382!4.95e-07!3;UBERON:0009663!5.21e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;8.72e-18;1!UBERON:0000200;6.00e-12;6!UBERON:0002771;1.44e-09;2!UBERON:0002702;1.44e-09;2!UBERON:0001950;1.14e-07;20!UBERON:0001264;1.57e-07;10!UBERON:0002619;4.78e-07;22!UBERON:0001870;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,4.44e-18,1;UBERON:0000200,6.70e-12,6;UBERON:0002771,1.22e-09,2;UBERON:0002702,2.02e-09,2;UBERON:0001950,1.28e-07,20;UBERON:0001264,1.52e-07,10;UBERON:0002619,5.31e-07,22 | |||
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| ||
|short_description=p@chr1:152084264..152084306,- | |short_description=p@chr1:152084264..152084306,- | ||
}} | }} |
Latest revision as of 21:32, 27 July 2015
Short description: | p@chr1:152084264..152084306, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:152084264..152084306, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.57e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
surface | 4.44e-18 | 1 |
gyrus | 6.70e-12 | 6 |
middle temporal gyrus | 1.22e-09 | 2 |
middle frontal gyrus | 2.02e-09 | 2 |
neocortex | 1.28e-07 | 20 |
pancreas | 1.52e-07 | 10 |
regional part of cerebral cortex | 5.31e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.12e-09 | 2 |
carcinosarcoma | 1.12e-09 | 2 |
pancreas adenocarcinoma | 1.33e-09 | 2 |
pancreatic carcinoma | 1.33e-09 | 2 |
pancreatic ductal adenocarcinoma | 1.33e-09 | 2 |