FFCP PHASE1:Hg19::chr1:145442026..145442088,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:145442026..145442088,+ to FFCP PHASE1:Hg19::chr1:145442026..145442088,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:145442026..145442088,+ | |||
|coexpression_cluster_id=C1833 | |||
|description=CAGE_peak_at_chr1:145442026..145442088,+ | |||
|id=chr1:145442026..145442088,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.71e-13!140;CL:0000766!7.94e-12!76;CL:0002057!1.06e-11!42;CL:0002087!1.90e-11!119;CL:0002031!2.12e-11!124;CL:0002032!2.34e-11!165;CL:0000837!2.34e-11!165;CL:0000037!5.53e-11!172;CL:0000566!5.53e-11!172;CL:0000860!1.76e-10!45;CL:0000557!1.12e-09!71;CL:0000988!2.52e-09!182;CL:0000839!3.96e-09!70;CL:0002009!4.49e-09!65;CL:0000763!5.52e-09!112;CL:0000049!5.52e-09!112;CL:0002194!5.95e-09!63;CL:0000576!5.95e-09!63;CL:0000040!5.95e-09!63;CL:0000559!5.95e-09!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.71e-09;33!CL:0002057;2.71e-09;33!CL:0000766;1.49e-07;69!CL:0000473;1.50e-07;39!CL:0000234;1.50e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.19e-14,136;CL:0000766,1.54e-13,72;CL:0002031,8.17e-13,120;CL:0002087,1.87e-12,115;CL:0000860,2.93e-12,42;CL:0002057,2.93e-12,42;CL:0000473,9.94e-12,48;CL:0000234,9.94e-12,48;CL:0000839,1.59e-10,66;CL:0000557,3.14e-10,67;CL:0000037,9.57e-10,168;CL:0002032,1.02e-09,161;CL:0000837,1.02e-09,161;CL:0002194,3.58e-09,59;CL:0000576,3.58e-09,59;CL:0000040,3.58e-09,59;CL:0000559,3.58e-09,59;CL:0002009,1.30e-08,61;CL:0000988,1.82e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;6.85e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.49e-12!115;UBERON:0002390!1.07e-09!102;UBERON:0003061!1.07e-09!102;UBERON:0002193!4.54e-09!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.58e-12,114;UBERON:0002390,8.05e-12,98;UBERON:0003061,8.05e-12,98;UBERON:0002193,2.08e-10,108;UBERON:0002371,5.75e-08,76;UBERON:0001474,2.76e-07,82 | |||
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| ||
|short_description=p@chr1:145442026..145442088,+ | |||
}} | }} |
Latest revision as of 20:47, 27 July 2015
Short description: | p@chr1:145442026..145442088, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:145442026..145442088, + |
Coexpression cluster: | C1833_Neutrophils_blood_lymph_left_breast_Peripheral_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.19e-14 | 136 |
myeloid leukocyte | 1.54e-13 | 72 |
hematopoietic lineage restricted progenitor cell | 8.17e-13 | 120 |
nongranular leukocyte | 1.87e-12 | 115 |
classical monocyte | 2.93e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.93e-12 | 42 |
defensive cell | 9.94e-12 | 48 |
phagocyte | 9.94e-12 | 48 |
myeloid lineage restricted progenitor cell | 1.59e-10 | 66 |
granulocyte monocyte progenitor cell | 3.14e-10 | 67 |
hematopoietic stem cell | 9.57e-10 | 168 |
hematopoietic oligopotent progenitor cell | 1.02e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-09 | 161 |
monopoietic cell | 3.58e-09 | 59 |
monocyte | 3.58e-09 | 59 |
monoblast | 3.58e-09 | 59 |
promonocyte | 3.58e-09 | 59 |
macrophage dendritic cell progenitor | 1.30e-08 | 61 |
hematopoietic cell | 1.82e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.58e-12 | 114 |
hematopoietic system | 8.05e-12 | 98 |
blood island | 8.05e-12 | 98 |
hemolymphoid system | 2.08e-10 | 108 |
bone marrow | 5.75e-08 | 76 |
bone element | 2.76e-07 | 82 |