FFCP PHASE1:Hg19::chr1:12239065..12239070,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:12239065..12239070,- | |||
|description=CAGE_peak_at_chr1:12239065..12239070,- | |description=CAGE_peak_at_chr1:12239065..12239070,- | ||
|id=chr1:12239065..12239070,- | |id=chr1:12239065..12239070,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000037;2.15e-26;1!CL:0001024;2.15e-26;1!CL:1001319;6.72e-26;1!CL:1000600;6.72e-26;1!CL:0002545;1.14e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,2.16e-26,1;CL:1001319,4.61e-26,1;CL:1000600,4.61e-26,1;CL:0002545,1.21e-13,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.14e-13;2!DOID:4556;1.47e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,8.28e-14,2;DOID:4556,1.67e-09,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;6.72e-26;1!UBERON:0001256;6.72e-26;1!UBERON:0001259;6.72e-26;1!UBERON:0001255;1.14e-13;2!UBERON:0005800;1.14e-13;2!UBERON:0001515;1.14e-13;2!UBERON:0001556;1.14e-13;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,4.61e-26,1;UBERON:0001256,4.61e-26,1;UBERON:0001259,4.61e-26,1;UBERON:0001255,9.40e-14,2;UBERON:0001556,9.40e-14,2;UBERON:0005800,1.21e-13,2;UBERON:0001515,1.21e-13,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0.0787107813136792,0,0,0.464448369948228,0,0,0,0,0,4.40400659002271,0.553995408531877,0.401088894940283,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.434377689410233,0,0.368277635987565,0,0,0.425208599930087,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.68152568894461,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.23486899728753,0.323745888736263,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.413509717453592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699869440489966,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.865615277858669,0.355709216742071,0.956557636372934,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0.37950746544837,0.158936578980379,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0,0,0,0,0,0.171594997861965,0,0.124252535565433,0,0.951329442515298,0.523014231561666,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,1.26720403823288,0,0,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,1.12482367165896,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0.381382095467167,0.690359926060101,0.397832444232549,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0.173858272302579,0,0,0,0,0,0.354996002191696,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.596852325484105,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,1.70946864083046,0,1.9307228228694,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0.0787107813136792,0,0,0.464448369948228,0,0,0,0,0,4.40400659002271,0.553995408531877,0.401088894940283,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.434377689410233,0,0.368277635987565,0,0,0.425208599930087,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.68152568894461,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.23486899728753,0.323745888736263,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.413509717453592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699869440489966,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.865615277858669,0.355709216742071,0.956557636372934,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0.37950746544837,0.158936578980379,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0,0,0,0,0,0.171594997861965,0,0.124252535565433,0,0.951329442515298,0.523014231561666,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,1.26720403823288,0,0,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,1.12482367165896,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0.381382095467167,0.690359926060101,0.397832444232549,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0.173858272302579,0,0,0,0,0,0.354996002191696,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.596852325484105,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,1.70946864083046,0,1.9307228228694,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:12239065..12239070,- | |short_description=p@chr1:12239065..12239070,- | ||
}} | }} |
Latest revision as of 20:26, 27 July 2015
Short description: | p@chr1:12239065..12239070, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:12239065..12239070, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 2.16e-26 | 1 |
bladder cell | 4.61e-26 | 1 |
lower urinary tract cell | 4.61e-26 | 1 |
thoracic aorta endothelial cell | 1.21e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 4.61e-26 | 1 |
wall of urinary bladder | 4.61e-26 | 1 |
mucosa of urinary bladder | 4.61e-26 | 1 |
urinary bladder | 9.40e-14 | 2 |
lower urinary tract | 9.40e-14 | 2 |
segment of aorta | 1.21e-13 | 2 |
thoracic aorta | 1.21e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 8.28e-14 | 2 |
lung large cell carcinoma | 1.67e-09 | 3 |