FFCP PHASE1:Hg19::chr1:118691024..118691028,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:118691024..118691028,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr1:118691024..118691028,- | |description=CAGE_peak_at_chr1:118691024..118691028,- | ||
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|ontology_enrichment_celltype=CL:0002150!1.33e-12!3;CL:0000861!1.33e-12!3;CL:1001319!1.17e-09!1;CL:1000600!1.17e-09!1 | |ontology_enrichment_celltype=CL:0002150!1.33e-12!3;CL:0000861!1.33e-12!3;CL:1001319!1.17e-09!1;CL:1000600!1.17e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0002149;2.59e-12;6!CL:0002255;2.59e-12;6 | |ontology_enrichment_celltype_v019=CL:0002149;2.59e-12;6!CL:0002255;2.59e-12;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.74e-12,6;CL:0002255,2.74e-12,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.22e-27;10!UBERON:0005564;2.22e-27;10!UBERON:0006603;1.35e-08;65!UBERON:0005795;6.34e-08;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.22e-27;10!UBERON:0005564;2.22e-27;10!UBERON:0006603;1.35e-08;65!UBERON:0005795;6.34e-08;10 | ||
|ontology_enrichment_disease=DOID:6193!4.85e-10!1;DOID:0050687!1.87e-09!143;DOID:305!4.55e-08!106 | |ontology_enrichment_disease=DOID:6193!4.85e-10!1;DOID:0050687!1.87e-09!143;DOID:305!4.55e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:3001;2.59e-12;6 | |ontology_enrichment_disease_v019=DOID:3001;2.59e-12;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3001,2.74e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001282!3.40e-10!1;UBERON:0009842!3.40e-10!1;UBERON:0003704!3.40e-10!1;UBERON:0001171!3.40e-10!1;UBERON:0001172!3.40e-10!1;UBERON:0004645!1.17e-09!1;UBERON:0001256!1.17e-09!1;UBERON:0001259!1.17e-09!1;UBERON:0003350!1.17e-07!5;UBERON:0000344!7.33e-07!12 | |ontology_enrichment_uberon=UBERON:0001282!3.40e-10!1;UBERON:0009842!3.40e-10!1;UBERON:0003704!3.40e-10!1;UBERON:0001171!3.40e-10!1;UBERON:0001172!3.40e-10!1;UBERON:0004645!1.17e-09!1;UBERON:0001256!1.17e-09!1;UBERON:0001259!1.17e-09!1;UBERON:0003350!1.17e-07!5;UBERON:0000344!7.33e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.07e-34;8!UBERON:0003135;5.16e-25;11!UBERON:0000991;1.05e-13;21!UBERON:0003101;3.89e-13;22!UBERON:0000079;3.89e-13;22!UBERON:0003133;6.96e-12;44 | |ontology_enrichment_uberon_v019=UBERON:0000473;7.07e-34;8!UBERON:0003135;5.16e-25;11!UBERON:0000991;1.05e-13;21!UBERON:0003101;3.89e-13;22!UBERON:0000079;3.89e-13;22!UBERON:0003133;6.96e-12;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0003133,2.00e-13,48;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0005156,3.99e-11,59;UBERON:0000990,3.99e-11,59;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p@chr1:118691024..118691028,- | |short_description=p@chr1:118691024..118691028,- | ||
}} | }} |
Latest revision as of 20:15, 27 July 2015
Short description: | p@chr1:118691024..118691028, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:118691024..118691028, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.74e-12 | 6 |
stromal cell of endometrium | 2.74e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
reproductive organ | 2.00e-13 | 48 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
reproductive structure | 3.99e-11 | 59 |
reproductive system | 3.99e-11 | 59 |
body cavity | 7.30e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.74e-12 | 6 |