FFCP PHASE1:Hg19::chr1:115801241..115801245,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:115801241..115801245,+ | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr1:115801241..115801245,+ | |description=CAGE_peak_at_chr1:115801241..115801245,+ | ||
|id=chr1:115801241..115801245,+ | |id=chr1:115801241..115801245,+ | ||
|ontology_enrichment_celltype=CL:0000064!1.91e-15!3;CL:0005012!1.91e-15!3;CL:0000067!1.91e-15!3;CL:0002304!1.91e-15!3;CL:0000569!1.22e-12!4;CL:0000011!1.22e-12!4;CL:0002570!1.30e-10!8;CL:0000057!4.34e-10!75;CL:0002334!5.42e-10!12;CL:0002494!4.84e-08!16;CL:0002580!1.99e-07!3 | |ontology_enrichment_celltype=CL:0000064!1.91e-15!3;CL:0005012!1.91e-15!3;CL:0000067!1.91e-15!3;CL:0002304!1.91e-15!3;CL:0000569!1.22e-12!4;CL:0000011!1.22e-12!4;CL:0002570!1.30e-10!8;CL:0000057!4.34e-10!75;CL:0002334!5.42e-10!12;CL:0002494!4.84e-08!16;CL:0002580!1.99e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002591;7.62e-26;1!CL:0000135;1.14e-09;3!CL:0000388;1.14e-09;3!CL:1000306;1.31e-07;4!CL:0002547;1.31e-07;4!CL:0000569;1.44e-07;4!CL:0002494;3.61e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,9.79e-26,1;CL:0000135,1.19e-09,3;CL:0000388,1.19e-09,3;CL:1000306,1.31e-07,4;CL:0002547,1.31e-07,4;CL:0000569,1.40e-07,4;CL:0000011,1.40e-07,4;CL:0002494,3.34e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000011;1.44e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!2.26e-20!4;UBERON:0001778!1.91e-15!3;UBERON:0001775!1.91e-15!3;UBERON:0002203!1.22e-13!6;UBERON:0001768!1.22e-13!6;UBERON:0007625!1.75e-07!11;UBERON:0002200!1.75e-07!11;UBERON:0006876!1.75e-07!11;UBERON:0000948!2.29e-07!24;UBERON:0005498!2.29e-07!24;UBERON:0004140!2.29e-07!24;UBERON:0009881!2.29e-07!24;UBERON:0004141!2.29e-07!24;UBERON:0003084!2.29e-07!24;UBERON:0007005!2.29e-07!24;UBERON:0004139!2.29e-07!24;UBERON:0004291!2.29e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;1.21e-13;2!UBERON:0002012;1.21e-13;2!UBERON:0008886;1.21e-13;2!UBERON:0007846;1.14e-09;3!UBERON:0000043;1.14e-09;3!UBERON:0007845;1.14e-09;3!UBERON:0004797;1.31e-07;4!UBERON:0000415;1.31e-07;4!UBERON:0007240;1.31e-07;4!UBERON:0005742;1.31e-07;4!UBERON:0005734;1.31e-07;4!UBERON:0004664;1.31e-07;4!UBERON:0004663;1.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,1.37e-13,2;UBERON:0007497,1.37e-13,2;UBERON:0003643,1.37e-13,2;UBERON:0003504,1.37e-13,2;UBERON:0003469,1.37e-13,2;UBERON:0003496,1.37e-13,2;UBERON:0002012,1.37e-13,2;UBERON:0008886,1.37e-13,2;UBERON:0007303,1.37e-13,2;UBERON:0002061,1.37e-13,2;UBERON:0005432,1.37e-13,2;UBERON:0004363,1.37e-13,2;UBERON:0000948,5.40e-10,24;UBERON:0005498,5.40e-10,24;UBERON:0004140,5.40e-10,24;UBERON:0009881,5.40e-10,24;UBERON:0004141,5.40e-10,24;UBERON:0003084,5.40e-10,24;UBERON:0007005,5.40e-10,24;UBERON:0004139,5.40e-10,24;UBERON:0004291,5.40e-10,24;UBERON:0007846,1.19e-09,3;UBERON:0000043,1.19e-09,3;UBERON:0007845,1.19e-09,3;UBERON:0004145,1.67e-09,3;UBERON:0007100,5.90e-09,27;UBERON:0000415,1.31e-07,4;UBERON:0007240,1.31e-07,4;UBERON:0005742,1.31e-07,4;UBERON:0005734,1.31e-07,4;UBERON:0004664,1.31e-07,4;UBERON:0004663,1.31e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.95841313659485,0,0,1.68203280042692,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0.0920498986422993,1.2931684545505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07057393278297,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.384417447767103,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,1.40227985908335,0.554805861502613,0,0,0,0.686520205190771,2.41969478021182,0.777186002913902,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16313281061895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.95841313659485,0,0,1.68203280042692,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0.0920498986422993,1.2931684545505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07057393278297,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.384417447767103,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,1.40227985908335,0.554805861502613,0,0,0,0.686520205190771,2.41969478021182,0.777186002913902,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16313281061895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:115801241..115801245,+ | |short_description=p@chr1:115801241..115801245,+ | ||
}} | }} |
Latest revision as of 20:01, 27 July 2015
Short description: | p@chr1:115801241..115801245, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:115801241..115801245, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 9.79e-26 | 1 |
fibrocyte | 1.19e-09 | 3 |
tendon cell | 1.19e-09 | 3 |
fibroblast of tunica adventitia of artery | 1.31e-07 | 4 |
fibroblast of the aortic adventitia | 1.31e-07 | 4 |
cardiac mesenchymal cell | 1.40e-07 | 4 |
migratory trunk neural crest cell | 1.40e-07 | 4 |
cardiocyte | 3.34e-07 | 16 |