FFCP PHASE1:Hg19::chr1:114654778..114654823,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:114654778..114654823,+ | |||
|coexpression_cluster_id=C445 | |||
|description=CAGE_peak_at_chr1:114654778..114654823,+ | |description=CAGE_peak_at_chr1:114654778..114654823,+ | ||
|id=chr1:114654778..114654823,+ | |id=chr1:114654778..114654823,+ | ||
|ontology_enrichment_celltype=CL:0002536!1.12e-09!2;CL:0000815!1.22e-09!2;CL:0000792!1.22e-09!2;CL:0002677!1.22e-09!2;CL:0000242!1.33e-09!2;CL:0002549!1.71e-09!2;CL:0000898!7.70e-07!3 | |ontology_enrichment_celltype=CL:0002536!1.12e-09!2;CL:0000815!1.22e-09!2;CL:0000792!1.22e-09!2;CL:0002677!1.22e-09!2;CL:0000242!1.33e-09!2;CL:0002549!1.71e-09!2;CL:0000898!7.70e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.71e-14;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.71e-14;5 | |||
|ontology_enrichment_disease=DOID:3112!3.75e-18!1;DOID:3193!8.69e-10!2;DOID:962!8.69e-10!2;DOID:3095!2.47e-07!22;DOID:2994!2.47e-07!22;DOID:305!3.02e-07!106;DOID:1192!6.14e-07!3;DOID:0050687!7.73e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3112;3.34e-66;1!DOID:3193;5.96e-34;2!DOID:962;5.96e-34;2!DOID:1192;3.66e-23;3!DOID:169;2.59e-12;6!DOID:171;6.34e-08;10!DOID:3093;8.14e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,4.66e-66,1;DOID:3193,5.04e-34,2;DOID:962,5.04e-34,2;DOID:1192,3.27e-23,3;DOID:169,2.45e-12,6;DOID:171,6.13e-08,10;DOID:3093,7.92e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001301!1.03e-17!1;UBERON:0003714!8.69e-10!2;UBERON:0003947!1.71e-09!2;UBERON:0005629!1.71e-09!2;UBERON:0005358!1.71e-09!2;UBERON:0001886!1.71e-09!2;UBERON:0004086!1.71e-09!2;UBERON:0005282!1.71e-09!2;UBERON:0005281!1.71e-09!2;UBERON:0003135!7.37e-07!11;UBERON:0006947!9.12e-07!3;UBERON:0004054!9.12e-07!3;UBERON:0002300!9.64e-07!3 | |ontology_enrichment_uberon=UBERON:0001301!1.03e-17!1;UBERON:0003714!8.69e-10!2;UBERON:0003947!1.71e-09!2;UBERON:0005629!1.71e-09!2;UBERON:0005358!1.71e-09!2;UBERON:0001886!1.71e-09!2;UBERON:0004086!1.71e-09!2;UBERON:0005282!1.71e-09!2;UBERON:0005281!1.71e-09!2;UBERON:0003135!7.37e-07!11;UBERON:0006947!9.12e-07!3;UBERON:0004054!9.12e-07!3;UBERON:0002300!9.64e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003714;5.96e-34;2!UBERON:0002046;1.71e-14;5!UBERON:0000013;1.71e-14;5!UBERON:0002410;1.71e-14;5!UBERON:0000010;1.16e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,5.04e-34,2;UBERON:0000013,1.60e-14,5;UBERON:0002410,1.60e-14,5;UBERON:0002046,1.83e-14,5;UBERON:0004117,1.83e-14,5;UBERON:0007689,1.83e-14,5;UBERON:0007123,1.83e-14,5;UBERON:0003091,1.83e-14,5;UBERON:0000010,1.12e-08,8;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11 | |||
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|short_description=p@chr1:114654778..114654823,+ | |short_description=p@chr1:114654778..114654823,+ | ||
}} | }} |
Latest revision as of 19:57, 27 July 2015
Short description: | p@chr1:114654778..114654823, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:114654778..114654823, + |
Coexpression cluster: | C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 5.04e-34 | 2 |
sympathetic nervous system | 1.60e-14 | 5 |
autonomic nervous system | 1.60e-14 | 5 |
thyroid gland | 1.83e-14 | 5 |
pharyngeal pouch | 1.83e-14 | 5 |
thyroid diverticulum | 1.83e-14 | 5 |
pharyngeal pouch 2 | 1.83e-14 | 5 |
thyroid primordium | 1.83e-14 | 5 |
peripheral nervous system | 1.12e-08 | 8 |
entire pharyngeal arch endoderm | 2.63e-07 | 11 |
early pharyngeal endoderm | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 4.66e-66 | 1 |
peripheral nerve sheath neoplasm | 5.04e-34 | 2 |
neurofibroma | 5.04e-34 | 2 |
peripheral nervous system neoplasm | 3.27e-23 | 3 |
neuroendocrine tumor | 2.45e-12 | 6 |
neuroectodermal tumor | 6.13e-08 | 10 |
nervous system cancer | 7.92e-07 | 11 |