FFCP PHASE1:Hg19::chr1:111441802..111441817,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:111441802..111441817,+ | |||
|coexpression_cluster_id=C469 | |||
|description=CAGE_peak_at_chr1:111441802..111441817,+ | |description=CAGE_peak_at_chr1:111441802..111441817,+ | ||
|id=chr1:111441802..111441817,+ | |id=chr1:111441802..111441817,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.23e-58!140;CL:0002057!2.92e-58!42;CL:0002087!1.29e-56!119;CL:0000766!2.49e-55!76;CL:0000037!8.35e-54!172;CL:0000566!8.35e-54!172;CL:0002032!9.55e-54!165;CL:0000837!9.55e-54!165;CL:0000860!1.83e-53!45;CL:0002031!4.23e-53!124;CL:0000988!1.23e-52!182;CL:0002009!5.81e-52!65;CL:0002194!9.89e-52!63;CL:0000576!9.89e-52!63;CL:0000040!9.89e-52!63;CL:0000559!9.89e-52!63;CL:0000557!2.88e-50!71;CL:0000839!5.10e-49!70;CL:0000763!1.58e-44!112;CL:0000049!1.58e-44!112;CL:0000134!1.17e-13!358;CL:0002320!5.61e-13!365;CL:0000219!1.31e-10!390;CL:0000542!5.84e-09!53;CL:0000051!5.84e-09!53;CL:0000838!2.78e-08!52;CL:0002393!4.06e-08!9;CL:0002397!4.06e-08!9;CL:0000048!7.31e-08!430;CL:0000084!7.60e-08!25;CL:0000827!7.60e-08!25;CL:0000723!1.75e-07!436;CL:0000034!5.34e-07!444 | |ontology_enrichment_celltype=CL:0000738!1.23e-58!140;CL:0002057!2.92e-58!42;CL:0002087!1.29e-56!119;CL:0000766!2.49e-55!76;CL:0000037!8.35e-54!172;CL:0000566!8.35e-54!172;CL:0002032!9.55e-54!165;CL:0000837!9.55e-54!165;CL:0000860!1.83e-53!45;CL:0002031!4.23e-53!124;CL:0000988!1.23e-52!182;CL:0002009!5.81e-52!65;CL:0002194!9.89e-52!63;CL:0000576!9.89e-52!63;CL:0000040!9.89e-52!63;CL:0000559!9.89e-52!63;CL:0000557!2.88e-50!71;CL:0000839!5.10e-49!70;CL:0000763!1.58e-44!112;CL:0000049!1.58e-44!112;CL:0000134!1.17e-13!358;CL:0002320!5.61e-13!365;CL:0000219!1.31e-10!390;CL:0000542!5.84e-09!53;CL:0000051!5.84e-09!53;CL:0000838!2.78e-08!52;CL:0002393!4.06e-08!9;CL:0002397!4.06e-08!9;CL:0000048!7.31e-08!430;CL:0000084!7.60e-08!25;CL:0000827!7.60e-08!25;CL:0000723!1.75e-07!436;CL:0000034!5.34e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.25e-84;33!CL:0002057;2.25e-84;33!CL:0000473;7.79e-67;39!CL:0000234;7.79e-67;39!CL:0000576;4.78e-38;48!CL:0000766;5.22e-28;69!CL:0000763;6.76e-14;100!CL:0002087;3.91e-13;104!CL:0000738;2.01e-10;136!CL:0000775;2.61e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.78e-72,48;CL:0000234,3.78e-72,48;CL:0000860,6.71e-70,42;CL:0002057,6.71e-70,42;CL:0002194,9.91e-57,59;CL:0000576,9.91e-57,59;CL:0000040,9.91e-57,59;CL:0000559,9.91e-57,59;CL:0002009,9.69e-55,61;CL:0000766,3.59e-54,72;CL:0000839,2.77e-50,66;CL:0000557,1.80e-49,67;CL:0002087,1.41e-34,115;CL:0000763,1.53e-34,108;CL:0000049,1.53e-34,108;CL:0000738,1.93e-33,136;CL:0002031,6.33e-33,120;CL:0002032,2.04e-27,161;CL:0000837,2.04e-27,161;CL:0000037,4.77e-26,168;CL:0000988,1.91e-24,177;CL:0000134,2.22e-09,354;CL:0000775,2.73e-09,3;CL:0002320,4.38e-09,361;CL:0000219,4.80e-08,386;CL:0000048,9.02e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;3.24e-52;42!CL:0000049;1.31e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.08e-52!102;UBERON:0003061!2.08e-52!102;UBERON:0002193!5.32e-48!112;UBERON:0002371!7.68e-43!80;UBERON:0001474!9.31e-39!86;UBERON:0002405!7.33e-33!115;UBERON:0004765!1.08e-30!101;UBERON:0001434!1.08e-30!101;UBERON:0003081!1.28e-16!216;UBERON:0002204!8.30e-13!167;UBERON:0002384!1.36e-12!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;3.84e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.19e-43,76;UBERON:0001474,1.26e-39,82;UBERON:0002405,1.75e-37,93;UBERON:0004765,1.06e-35,90;UBERON:0002390,2.38e-35,98;UBERON:0003061,2.38e-35,98;UBERON:0002193,2.14e-34,108;UBERON:0001434,1.15e-31,100;UBERON:0002204,5.23e-17,167;UBERON:0003081,1.84e-14,203;UBERON:0002384,1.11e-08,371;UBERON:0000926,1.81e-07,315;UBERON:0004120,1.81e-07,315;UBERON:0006603,1.81e-07,315;UBERON:0000029,3.02e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0.32389366601898,0,0.436194716338694,1.51150377475524,0.242584061187816,0.232429036905685,1.6446715520873,0.929119112685311,2.3015391385772,3.84241059793651,1.41889337933151,1.03423704220986,1.29096936716765,1.35426486594342,1.12945403725563,2.18324920046277,1.57306439111559,2.44867113896722,1.28371610830437,0,0.989553900560148,5.18605509816243,1.27867425159808,1.16083695451434,1.13477044938228,1.24564449799115,2.26123798731069,2.60741459210101,1.95469960234605,3.63239701580021,1.10483290796269,0.949387162322653,0.211255286311942,0.425208599930087,0.209658645508376,0.112328631146495,0.450530678524519,0.32145117339416,0.285012743741249,0.39783335439818,0,1.75996244461323,1.09227722252426,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0,1.92136979588513,1.04047478047903,0.657751618414705,0.276350017785848,0,0,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0.950452044448374,0.150575119077773,0,0,0.236777252044017,0.821127996921047,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0.664789802594326,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,1.0404181360211,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,6.32501818449095,0,0,0,0,0,0,0.112085143993527,0,1.07813787429759,0,0,0,0,0,0,2.24702107184155,5.9832291840805,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0.648473311192717,0,1.58625035258854,0,0,0,0.185803175125719,0,0,0.159426272728822,0,0,0.211673582723883,0,0.561594356226918,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0.494411622680279,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0,0,0.593042257361244,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0.320568492303233 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0.32389366601898,0,0.436194716338694,1.51150377475524,0.242584061187816,0.232429036905685,1.6446715520873,0.929119112685311,2.3015391385772,3.84241059793651,1.41889337933151,1.03423704220986,1.29096936716765,1.35426486594342,1.12945403725563,2.18324920046277,1.57306439111559,2.44867113896722,1.28371610830437,0,0.989553900560148,5.18605509816243,1.27867425159808,1.16083695451434,1.13477044938228,1.24564449799115,2.26123798731069,2.60741459210101,1.95469960234605,3.63239701580021,1.10483290796269,0.949387162322653,0.211255286311942,0.425208599930087,0.209658645508376,0.112328631146495,0.450530678524519,0.32145117339416,0.285012743741249,0.39783335439818,0,1.75996244461323,1.09227722252426,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0,1.92136979588513,1.04047478047903,0.657751618414705,0.276350017785848,0,0,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0.950452044448374,0.150575119077773,0,0,0.236777252044017,0.821127996921047,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0.664789802594326,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,1.0404181360211,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,6.32501818449095,0,0,0,0,0,0,0.112085143993527,0,1.07813787429759,0,0,0,0,0,0,2.24702107184155,5.9832291840805,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0.648473311192717,0,1.58625035258854,0,0,0,0.185803175125719,0,0,0.159426272728822,0,0,0.211673582723883,0,0.561594356226918,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0.494411622680279,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0,0,0.593042257361244,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0.320568492303233 | ||
|short_description=p@chr1:111441802..111441817,+ | |short_description=p@chr1:111441802..111441817,+ | ||
}} | }} |
Latest revision as of 19:38, 27 July 2015
Short description: | p@chr1:111441802..111441817, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:111441802..111441817, + |
Coexpression cluster: | C469_Neutrophils_Monocytederived_CD14_CD19_Eosinophils_blood_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.78e-72 | 48 |
phagocyte | 3.78e-72 | 48 |
classical monocyte | 6.71e-70 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.71e-70 | 42 |
monopoietic cell | 9.91e-57 | 59 |
monocyte | 9.91e-57 | 59 |
monoblast | 9.91e-57 | 59 |
promonocyte | 9.91e-57 | 59 |
macrophage dendritic cell progenitor | 9.69e-55 | 61 |
myeloid leukocyte | 3.59e-54 | 72 |
myeloid lineage restricted progenitor cell | 2.77e-50 | 66 |
granulocyte monocyte progenitor cell | 1.80e-49 | 67 |
nongranular leukocyte | 1.41e-34 | 115 |
myeloid cell | 1.53e-34 | 108 |
common myeloid progenitor | 1.53e-34 | 108 |
leukocyte | 1.93e-33 | 136 |
hematopoietic lineage restricted progenitor cell | 6.33e-33 | 120 |
hematopoietic oligopotent progenitor cell | 2.04e-27 | 161 |
hematopoietic multipotent progenitor cell | 2.04e-27 | 161 |
hematopoietic stem cell | 4.77e-26 | 168 |
hematopoietic cell | 1.91e-24 | 177 |
mesenchymal cell | 2.22e-09 | 354 |
neutrophil | 2.73e-09 | 3 |
connective tissue cell | 4.38e-09 | 361 |
motile cell | 4.80e-08 | 386 |
multi fate stem cell | 9.02e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.19e-43 | 76 |
bone element | 1.26e-39 | 82 |
immune system | 1.75e-37 | 93 |
skeletal element | 1.06e-35 | 90 |
hematopoietic system | 2.38e-35 | 98 |
blood island | 2.38e-35 | 98 |
hemolymphoid system | 2.14e-34 | 108 |
skeletal system | 1.15e-31 | 100 |
musculoskeletal system | 5.23e-17 | 167 |
lateral plate mesoderm | 1.84e-14 | 203 |
connective tissue | 1.11e-08 | 371 |
mesoderm | 1.81e-07 | 315 |
mesoderm-derived structure | 1.81e-07 | 315 |
presumptive mesoderm | 1.81e-07 | 315 |
lymph node | 3.02e-07 | 1 |