FFCP PHASE1:Hg19::chr1:111418230..111418239,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:111418230..111418239,+ | |||
|coexpression_cluster_id=C3847 | |||
|description=CAGE_peak_at_chr1:111418230..111418239,+ | |description=CAGE_peak_at_chr1:111418230..111418239,+ | ||
|id=chr1:111418230..111418239,+ | |id=chr1:111418230..111418239,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.58e-44!140;CL:0002087!3.17e-41!119;CL:0000988!8.49e-40!182;CL:0002031!1.29e-38!124;CL:0000037!2.07e-38!172;CL:0000566!2.07e-38!172;CL:0002032!1.34e-36!165;CL:0000837!1.34e-36!165;CL:0000084!7.62e-30!25;CL:0000827!7.62e-30!25;CL:0000791!1.36e-27!18;CL:0000789!1.36e-27!18;CL:0002420!1.36e-27!18;CL:0002419!1.36e-27!18;CL:0000790!1.36e-27!18;CL:0002057!1.32e-23!42;CL:0000838!6.62e-23!52;CL:0000542!2.62e-22!53;CL:0000051!2.62e-22!53;CL:0000860!1.66e-21!45;CL:0000766!1.38e-17!76;CL:0000557!2.31e-16!71;CL:0002009!4.71e-16!65;CL:0000625!7.00e-16!11;CL:0002194!1.63e-15!63;CL:0000576!1.63e-15!63;CL:0000040!1.63e-15!63;CL:0000559!1.63e-15!63;CL:0000839!1.76e-15!70;CL:0000763!1.86e-15!112;CL:0000049!1.86e-15!112;CL:0000080!7.29e-12!6;CL:0000624!1.92e-11!6;CL:0000134!9.11e-09!358;CL:0002320!2.79e-08!365 | |ontology_enrichment_celltype=CL:0000738!1.58e-44!140;CL:0002087!3.17e-41!119;CL:0000988!8.49e-40!182;CL:0002031!1.29e-38!124;CL:0000037!2.07e-38!172;CL:0000566!2.07e-38!172;CL:0002032!1.34e-36!165;CL:0000837!1.34e-36!165;CL:0000084!7.62e-30!25;CL:0000827!7.62e-30!25;CL:0000791!1.36e-27!18;CL:0000789!1.36e-27!18;CL:0002420!1.36e-27!18;CL:0002419!1.36e-27!18;CL:0000790!1.36e-27!18;CL:0002057!1.32e-23!42;CL:0000838!6.62e-23!52;CL:0000542!2.62e-22!53;CL:0000051!2.62e-22!53;CL:0000860!1.66e-21!45;CL:0000766!1.38e-17!76;CL:0000557!2.31e-16!71;CL:0002009!4.71e-16!65;CL:0000625!7.00e-16!11;CL:0002194!1.63e-15!63;CL:0000576!1.63e-15!63;CL:0000040!1.63e-15!63;CL:0000559!1.63e-15!63;CL:0000839!1.76e-15!70;CL:0000763!1.86e-15!112;CL:0000049!1.86e-15!112;CL:0000080!7.29e-12!6;CL:0000624!1.92e-11!6;CL:0000134!9.11e-09!358;CL:0002320!2.79e-08!365 | ||
|ontology_enrichment_celltype_v019=CL:0000771;1.87e-13;2!CL:0000084;3.45e-11;25!CL:0000860;1.01e-09;33!CL:0002057;1.01e-09;33!CL:0002127;7.74e-08;1!CL:0000911;7.74e-08;1!CL:0000814;7.74e-08;1!CL:0000473;2.87e-07;39!CL:0000234;2.87e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,1.71e-13,2;CL:0000988,4.34e-12,177;CL:0000084,3.43e-11,25;CL:0000827,3.43e-11,25;CL:0002032,1.30e-09,161;CL:0000837,1.30e-09,161;CL:0000738,2.30e-09,136;CL:0000037,4.69e-09,168;CL:0002087,9.04e-09,115;CL:0002031,2.76e-08,120;CL:0000860,3.87e-08,42;CL:0002057,3.87e-08,42;CL:0002127,8.54e-08,1;CL:0000914,8.54e-08,1;CL:0000911,8.54e-08,1;CL:0000814,8.54e-08,1;CL:0002042,8.54e-08,1;CL:0002039,8.54e-08,1;CL:0002040,8.54e-08,1;CL:0002041,8.54e-08,1;CL:0000473,5.60e-07,48;CL:0000234,5.60e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.49e-23!102;UBERON:0003061!2.49e-23!102;UBERON:0002193!1.78e-21!112;UBERON:0002371!1.39e-13!80;UBERON:0001474!4.57e-12!86;UBERON:0002405!5.83e-11!115;UBERON:0000178!3.14e-09!15;UBERON:0000179!3.14e-09!15;UBERON:0000463!3.14e-09!15;UBERON:0004765!4.11e-09!101;UBERON:0001434!4.11e-09!101;UBERON:0002384!1.26e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!2.49e-23!102;UBERON:0003061!2.49e-23!102;UBERON:0002193!1.78e-21!112;UBERON:0002371!1.39e-13!80;UBERON:0001474!4.57e-12!86;UBERON:0002405!5.83e-11!115;UBERON:0000178!3.14e-09!15;UBERON:0000179!3.14e-09!15;UBERON:0000463!3.14e-09!15;UBERON:0004765!4.11e-09!101;UBERON:0001434!4.11e-09!101;UBERON:0002384!1.26e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.65e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.46e-08,108;UBERON:0002390,6.76e-08,98;UBERON:0003061,6.76e-08,98;UBERON:0000029,2.07e-07,1;UBERON:0000178,9.88e-07,15;UBERON:0000179,9.88e-07,15;UBERON:0000463,9.88e-07,15 | |||
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| ||
|short_description=p@chr1:111418230..111418239,+ | |short_description=p@chr1:111418230..111418239,+ | ||
}} | }} |
Latest revision as of 19:37, 27 July 2015
Short description: | p@chr1:111418230..111418239, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:111418230..111418239, + |
Coexpression cluster: | C3847_CD4_NK_CD14_Eosinophils_CD8_Peripheral_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 1.71e-13 | 2 |
hematopoietic cell | 4.34e-12 | 177 |
T cell | 3.43e-11 | 25 |
pro-T cell | 3.43e-11 | 25 |
hematopoietic oligopotent progenitor cell | 1.30e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.30e-09 | 161 |
leukocyte | 2.30e-09 | 136 |
hematopoietic stem cell | 4.69e-09 | 168 |
nongranular leukocyte | 9.04e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 2.76e-08 | 120 |
classical monocyte | 3.87e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.87e-08 | 42 |
innate effector T cell | 8.54e-08 | 1 |
immature NK T cell | 8.54e-08 | 1 |
effector T cell | 8.54e-08 | 1 |
mature NK T cell | 8.54e-08 | 1 |
immature NK T cell stage IV | 8.54e-08 | 1 |
immature NK T cell stage I | 8.54e-08 | 1 |
immature NK T cell stage II | 8.54e-08 | 1 |
immature NK T cell stage III | 8.54e-08 | 1 |
defensive cell | 5.60e-07 | 48 |
phagocyte | 5.60e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.46e-08 | 108 |
hematopoietic system | 6.76e-08 | 98 |
blood island | 6.76e-08 | 98 |
lymph node | 2.07e-07 | 1 |
blood | 9.88e-07 | 15 |
haemolymphatic fluid | 9.88e-07 | 15 |
organism substance | 9.88e-07 | 15 |