FFCP PHASE1:Hg19::chr1:110607538..110607549,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:110607538..110607549,- | |||
|description=CAGE_peak_at_chr1:110607538..110607549,- | |description=CAGE_peak_at_chr1:110607538..110607549,- | ||
|id=chr1:110607538..110607549,- | |id=chr1:110607538..110607549,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
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|ontology_enrichment_celltype_v019_2=CL:0002575,2.59e-12,2;CL:0002590,1.51e-08,3;CL:0000669,8.61e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.34e-23;1 | |ontology_enrichment_development_v019=UBERON:0010115;2.34e-23;1 | ||
|ontology_enrichment_disease=DOID:171!8.51e-10!10 | |ontology_enrichment_disease=DOID:171!8.51e-10!10 | ||
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|short_description=p@chr1:110607538..110607549,- | |short_description=p@chr1:110607538..110607549,- | ||
}} | }} |
Latest revision as of 19:29, 27 July 2015
Short description: | p@chr1:110607538..110607549, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:110607538..110607549, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 2.59e-12 | 2 |
smooth muscle cell of the brain vasculature | 1.51e-08 | 3 |
pericyte cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
dura mater | 2.10e-23 | 1 |
future meninx | 2.10e-23 | 1 |
ectomeninx | 2.10e-23 | 1 |
future dura mater | 2.10e-23 | 1 |
neural tissue | 1.48e-12 | 2 |
meninx | 2.07e-12 | 2 |
membrane organ | 2.07e-12 | 2 |
meningeal cluster | 2.07e-12 | 2 |
Ammon's horn | 2.90e-12 | 2 |
lobe parts of cerebral cortex | 2.90e-12 | 2 |
hippocampal formation | 2.90e-12 | 2 |
limbic lobe | 2.90e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.34e-23 | 1 |
peripheral nerve sheath neoplasm | 1.48e-12 | 2 |
neurofibroma | 1.48e-12 | 2 |
peripheral nervous system neoplasm | 8.31e-09 | 3 |
myeloid leukemia | 4.30e-07 | 31 |