FFCP PHASE1:Hg19::chr1:109126083..109126086,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:109126083..109126086,+
|short_description=p@chr1:109126083..109126086,+
|description=CAGE_peak_at_chr1:109126083..109126086,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:109126083..109126086,+ | |||
|coexpression_cluster_id=C1707 | |||
|description=CAGE_peak_at_chr1:109126083..109126086,+ | |||
|id=chr1:109126083..109126086,+ | |||
|ontology_enrichment_celltype=CL:0000860!5.60e-38!45;CL:0002087!1.58e-36!119;CL:0000738!2.29e-36!140;CL:0002057!2.48e-34!42;CL:0002031!1.89e-33!124;CL:0000839!2.74e-29!70;CL:0000766!5.61e-29!76;CL:0000557!1.13e-28!71;CL:0000037!1.81e-28!172;CL:0000566!1.81e-28!172;CL:0002194!1.06e-27!63;CL:0000576!1.06e-27!63;CL:0000040!1.06e-27!63;CL:0000559!1.06e-27!63;CL:0002009!1.92e-26!65;CL:0002032!6.90e-26!165;CL:0000837!6.90e-26!165;CL:0000988!1.21e-25!182;CL:0000763!8.65e-18!112;CL:0000049!8.65e-18!112;CL:0000219!1.67e-09!390;CL:0000134!2.20e-09!358;CL:0002320!8.69e-09!365;CL:0000084!1.08e-08!25;CL:0000827!1.08e-08!25;CL:0000791!2.69e-08!18;CL:0000789!2.69e-08!18;CL:0002420!2.69e-08!18;CL:0002419!2.69e-08!18;CL:0000790!2.69e-08!18;CL:0000542!8.24e-08!53;CL:0000051!8.24e-08!53;CL:0002393!1.13e-07!9;CL:0002397!1.13e-07!9;CL:0000838!3.04e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.12e-16;6!CL:0002397;1.12e-16;6!CL:0000226;7.01e-15;3!CL:0000623;7.01e-15;3!CL:0000842;7.01e-15;3!CL:0000511;8.62e-12;1!CL:0002625;8.62e-12;1!CL:0000216;8.62e-12;1!CL:0000624;4.90e-08;6!CL:0000576;1.33e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,8.92e-16,115;CL:0000623,6.10e-15,3;CL:0000825,6.10e-15,3;CL:0000226,8.08e-15,3;CL:0000842,8.08e-15,3;CL:0000738,4.88e-13,136;CL:0000511,4.06e-12,1;CL:0002625,4.06e-12,1;CL:0000216,4.06e-12,1;CL:0000860,1.08e-11,42;CL:0002057,1.08e-11,42;CL:0002393,2.89e-11,9;CL:0002397,2.89e-11,9;CL:0002031,7.77e-11,120;CL:0000037,3.63e-10,168;CL:0000473,3.81e-10,48;CL:0000234,3.81e-10,48;CL:0000988,1.52e-09,177;CL:0000624,4.66e-08,6;CL:0002194,5.60e-08,59;CL:0000576,5.60e-08,59;CL:0000040,5.60e-08,59;CL:0000559,5.60e-08,59;CL:0002009,1.07e-07,61;CL:0002032,1.24e-07,161;CL:0000837,1.24e-07,161;CL:0000839,4.53e-07,66;CL:0000557,5.89e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;7.85e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.29e-28!80;UBERON:0001474!1.50e-27!86;UBERON:0002390!9.77e-25!102;UBERON:0003061!9.77e-25!102;UBERON:0004765!2.55e-23!101;UBERON:0001434!2.55e-23!101;UBERON:0002193!4.40e-21!112;UBERON:0002405!1.44e-17!115;UBERON:0002204!9.56e-11!167;UBERON:0002384!5.49e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;8.62e-12;1!UBERON:0001343;8.62e-12;1!UBERON:0004910;8.62e-12;1!UBERON:0004813;8.62e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,4.06e-12,1;UBERON:0001343,4.06e-12,1;UBERON:0004910,4.06e-12,1;UBERON:0005154,4.06e-12,1;UBERON:0005295,4.06e-12,1;UBERON:0004813,4.06e-12,1;UBERON:0005297,4.06e-12,1;UBERON:0005294,4.06e-12,1;UBERON:0010141,4.06e-12,1;UBERON:0005891,4.06e-12,1;UBERON:0002390,1.88e-07,98;UBERON:0003061,1.88e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0.0774672005803016,0,0.293600439334847,1.10799081706375,4.61252229181326,2.17010870715852,0.447830948479849,0,0,0.581592955118259,0.377875943688809,0.727752183563449,0.697287110717054,1.23350366406548,0.309706370895104,0.28769239232215,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0.188242339542605,0.818718450173537,0.449446968890169,1.22433556948361,1.28371610830437,0.639337125799041,0.989553900560148,0.797854630486527,0.426224750532694,0.580418477257168,0,0,0.251248665256743,1.5644487552606,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0.112328631146495,0.600707571366025,0.64290234678832,0.285012743741249,0,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.983548850569165,3.14408610199332,1.23360899399706,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0.226618685395132,0,0,0,0.318565414324097,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,3.4767225451856,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0.723033089650446,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2937654491571,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,1.03384013061444,1.2942852049117,0.426910231213777,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0,0.154048617114644,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0.211125408127993,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0.153900517007594,0,0,0,0.108647371922008,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.290268993867255,0.438535902517113,0.328461828212837,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0.327609848846413,0,0,0.39997479170986,0,0.688859918643263,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0,0,0.504143392443436,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0.423387050190929,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0.118920090777569,0,0.329821550236287,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0,0,1.0580536810308,0,0,0,0,0,0,0.203977659483963,0,0.18378979906969,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0.0774672005803016,0,0.293600439334847,1.10799081706375,4.61252229181326,2.17010870715852,0.447830948479849,0,0,0.581592955118259,0.377875943688809,0.727752183563449,0.697287110717054,1.23350366406548,0.309706370895104,0.28769239232215,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0.188242339542605,0.818718450173537,0.449446968890169,1.22433556948361,1.28371610830437,0.639337125799041,0.989553900560148,0.797854630486527,0.426224750532694,0.580418477257168,0,0,0.251248665256743,1.5644487552606,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0.112328631146495,0.600707571366025,0.64290234678832,0.285012743741249,0,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.983548850569165,3.14408610199332,1.23360899399706,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0.226618685395132,0,0,0,0.318565414324097,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,3.4767225451856,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0.723033089650446,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2937654491571,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,1.03384013061444,1.2942852049117,0.426910231213777,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0,0.154048617114644,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0.211125408127993,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0.153900517007594,0,0,0,0.108647371922008,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.290268993867255,0.438535902517113,0.328461828212837,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0.327609848846413,0,0,0.39997479170986,0,0.688859918643263,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0,0,0.504143392443436,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0.423387050190929,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0.118920090777569,0,0.329821550236287,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0,0,1.0580536810308,0,0,0,0,0,0,0.203977659483963,0,0.18378979906969,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr1:109126083..109126086,+ | |||
}} | }} |
Latest revision as of 19:13, 27 July 2015
Short description: | p@chr1:109126083..109126086, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:109126083..109126086, + |
Coexpression cluster: | C1707_CD14_CD4_CD8_Natural_CD19_Monocytederived_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 8.92e-16 | 115 |
natural killer cell | 6.10e-15 | 3 |
pro-NK cell | 6.10e-15 | 3 |
single nucleate cell | 8.08e-15 | 3 |
mononuclear cell | 8.08e-15 | 3 |
leukocyte | 4.88e-13 | 136 |
androgen binding protein secreting cell | 4.06e-12 | 1 |
seminiferous tubule epithelial cell | 4.06e-12 | 1 |
Sertoli cell | 4.06e-12 | 1 |
classical monocyte | 1.08e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.08e-11 | 42 |
intermediate monocyte | 2.89e-11 | 9 |
CD14-positive, CD16-positive monocyte | 2.89e-11 | 9 |
hematopoietic lineage restricted progenitor cell | 7.77e-11 | 120 |
hematopoietic stem cell | 3.63e-10 | 168 |
defensive cell | 3.81e-10 | 48 |
phagocyte | 3.81e-10 | 48 |
hematopoietic cell | 1.52e-09 | 177 |
CD4-positive, alpha-beta T cell | 4.66e-08 | 6 |
monopoietic cell | 5.60e-08 | 59 |
monocyte | 5.60e-08 | 59 |
monoblast | 5.60e-08 | 59 |
promonocyte | 5.60e-08 | 59 |
macrophage dendritic cell progenitor | 1.07e-07 | 61 |
hematopoietic oligopotent progenitor cell | 1.24e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-07 | 161 |
myeloid lineage restricted progenitor cell | 4.53e-07 | 66 |
granulocyte monocyte progenitor cell | 5.89e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 4.06e-12 | 1 |
seminiferous tubule of testis | 4.06e-12 | 1 |
epithelium of male gonad | 4.06e-12 | 1 |
epithelial cord | 4.06e-12 | 1 |
sex cord | 4.06e-12 | 1 |
seminiferous tubule epithelium | 4.06e-12 | 1 |
testis sex cord | 4.06e-12 | 1 |
genital ridge | 4.06e-12 | 1 |
primitive sex cord of indifferent gonad | 4.06e-12 | 1 |
coelomic epithelium | 4.06e-12 | 1 |
hematopoietic system | 1.88e-07 | 98 |
blood island | 1.88e-07 | 98 |