FFCP PHASE1:Hg19::chr1:107765442..107765446,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:107765442..107765446,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr1:107765442..107765446,+ | |description=CAGE_peak_at_chr1:107765442..107765446,+ | ||
|id=chr1:107765442..107765446,+ | |id=chr1:107765442..107765446,+ | ||
|ontology_enrichment_celltype=CL:0002620!1.06e-07!23 | |ontology_enrichment_celltype=CL:0002620!1.06e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.95e-10;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!8.77e-12!10;DOID:3095!5.63e-09!22;DOID:2994!5.63e-09!22 | |ontology_enrichment_disease=DOID:171!8.77e-12!10;DOID:3095!5.63e-09!22;DOID:2994!5.63e-09!22 | ||
|ontology_enrichment_disease_v019=DOID:171;2.19e-29;10!DOID:3095;2.29e-13;22!DOID:2994;2.29e-13;22!DOID:3347;5.37e-13;1!DOID:1115;1.44e-09;20!DOID:169;7.61e-09;6!DOID:201;1.04e-08;6!DOID:0060100;1.04e-08;6!DOID:4231;3.92e-07;2!DOID:154;3.92e-07;2!DOID:3193;3.92e-07;2!DOID:4236;3.92e-07;2!DOID:962;3.92e-07;2!DOID:1907;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.78e-29,10;DOID:3095,2.54e-13,22;DOID:2994,2.54e-13,22;DOID:3347,6.06e-13,1;DOID:1115,1.34e-09,20;DOID:169,8.57e-09,6;DOID:201,9.27e-09,6;DOID:0060100,9.27e-09,6;DOID:4231,3.09e-07,2;DOID:1907,3.09e-07,2;DOID:154,3.48e-07,2;DOID:4236,3.48e-07,2;DOID:3193,4.69e-07,2;DOID:962,4.69e-07,2;DOID:0050687,5.82e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002020!1.54e-10!34;UBERON:0003528!1.54e-10!34;UBERON:0000073!5.98e-10!94;UBERON:0001016!5.98e-10!94;UBERON:0001049!1.07e-09!57;UBERON:0005068!1.07e-09!57;UBERON:0006241!1.07e-09!57;UBERON:0007135!1.07e-09!57;UBERON:0002346!5.19e-09!90;UBERON:0001869!5.70e-09!32;UBERON:0002619!8.45e-09!22;UBERON:0000956!9.65e-09!25;UBERON:0000203!9.65e-09!25;UBERON:0002791!1.44e-08!33;UBERON:0001950!2.17e-08!20;UBERON:0001893!3.44e-08!34;UBERON:0000924!4.42e-08!173;UBERON:0006601!4.42e-08!173;UBERON:0002780!5.01e-08!41;UBERON:0001890!5.01e-08!41;UBERON:0006240!5.01e-08!41;UBERON:0000010!1.01e-07!8;UBERON:0003080!1.01e-07!42;UBERON:0000013!1.41e-07!5;UBERON:0002410!1.41e-07!5;UBERON:0002616!1.69e-07!59;UBERON:0001017!4.58e-07!82 | |ontology_enrichment_uberon=UBERON:0002020!1.54e-10!34;UBERON:0003528!1.54e-10!34;UBERON:0000073!5.98e-10!94;UBERON:0001016!5.98e-10!94;UBERON:0001049!1.07e-09!57;UBERON:0005068!1.07e-09!57;UBERON:0006241!1.07e-09!57;UBERON:0007135!1.07e-09!57;UBERON:0002346!5.19e-09!90;UBERON:0001869!5.70e-09!32;UBERON:0002619!8.45e-09!22;UBERON:0000956!9.65e-09!25;UBERON:0000203!9.65e-09!25;UBERON:0002791!1.44e-08!33;UBERON:0001950!2.17e-08!20;UBERON:0001893!3.44e-08!34;UBERON:0000924!4.42e-08!173;UBERON:0006601!4.42e-08!173;UBERON:0002780!5.01e-08!41;UBERON:0001890!5.01e-08!41;UBERON:0006240!5.01e-08!41;UBERON:0000010!1.01e-07!8;UBERON:0003080!1.01e-07!42;UBERON:0000013!1.41e-07!5;UBERON:0002410!1.41e-07!5;UBERON:0002616!1.69e-07!59;UBERON:0001017!4.58e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.50e-27;4!UBERON:0000923;4.50e-27;4!UBERON:0010316;4.50e-27;4!UBERON:0005291;4.50e-27;4!UBERON:0002050;8.38e-22;5!UBERON:0005423;8.38e-22;5!UBERON:0002134;2.32e-13;1!UBERON:0005208;2.32e-13;1!UBERON:0004145;2.32e-13;1!UBERON:0005946;2.32e-13;1!UBERON:0005965;2.32e-13;1!UBERON:0002078;2.32e-13;1!UBERON:0000013;1.95e-10;5!UBERON:0002410;1.95e-10;5!UBERON:0002081;2.58e-07;2!UBERON:0002133;2.58e-07;2!UBERON:0003714;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.32e-13,1;UBERON:0005208,2.32e-13,1;UBERON:0005946,2.32e-13,1;UBERON:0005965,2.32e-13,1;UBERON:0002078,2.32e-13,1;UBERON:0000013,2.25e-10,5;UBERON:0002410,2.25e-10,5;UBERON:0002081,2.58e-07,2;UBERON:0002133,2.58e-07,2;UBERON:0010227,2.58e-07,2;UBERON:0003714,4.69e-07,2 | |||
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| ||
|short_description=p@chr1:107765442..107765446,+ | |short_description=p@chr1:107765442..107765446,+ | ||
}} | }} |
Latest revision as of 19:10, 27 July 2015
Short description: | p@chr1:107765442..107765446, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:107765442..107765446, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.32e-13 | 1 |
right atrium valve | 2.32e-13 | 1 |
outflow tract of atrium | 2.32e-13 | 1 |
outflow part of right atrium | 2.32e-13 | 1 |
right cardiac atrium | 2.32e-13 | 1 |
sympathetic nervous system | 2.25e-10 | 5 |
autonomic nervous system | 2.25e-10 | 5 |
cardiac atrium | 2.58e-07 | 2 |
atrioventricular valve | 2.58e-07 | 2 |
future cardiac atrium | 2.58e-07 | 2 |
neural tissue | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.78e-29 | 10 |
germ cell and embryonal cancer | 2.54e-13 | 22 |
germ cell cancer | 2.54e-13 | 22 |
osteosarcoma | 6.06e-13 | 1 |
sarcoma | 1.34e-09 | 20 |
neuroendocrine tumor | 8.57e-09 | 6 |
connective tissue cancer | 9.27e-09 | 6 |
musculoskeletal system cancer | 9.27e-09 | 6 |
histiocytoma | 3.09e-07 | 2 |
malignant fibroxanthoma | 3.09e-07 | 2 |
mixed cell type cancer | 3.48e-07 | 2 |
carcinosarcoma | 3.48e-07 | 2 |
peripheral nerve sheath neoplasm | 4.69e-07 | 2 |
neurofibroma | 4.69e-07 | 2 |
cell type cancer | 5.82e-07 | 143 |