FFCP PHASE1:Hg19::chr19:6062297..6062310,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:6062297..6062310,- | |||
|coexpression_cluster_id=C677 | |||
|description=CAGE_peak_at_chr19:6062297..6062310,- | |description=CAGE_peak_at_chr19:6062297..6062310,- | ||
|id=chr19:6062297..6062310,- | |id=chr19:6062297..6062310,- | ||
|ontology_enrichment_celltype=CL:0002057!7.29e-57!42;CL:0000860!2.20e-52!45;CL:0000766!2.52e-49!76;CL:0000557!3.34e-45!71;CL:0000763!3.26e-42!112;CL:0000049!3.26e-42!112;CL:0002009!4.95e-42!65;CL:0000738!5.25e-41!140;CL:0000839!9.69e-41!70;CL:0002194!2.49e-38!63;CL:0000576!2.49e-38!63;CL:0000040!2.49e-38!63;CL:0000559!2.49e-38!63;CL:0000037!8.98e-38!172;CL:0000566!8.98e-38!172;CL:0000988!8.20e-35!182;CL:0002032!3.55e-32!165;CL:0000837!3.55e-32!165;CL:0002031!1.85e-29!124;CL:0002087!1.09e-27!119;CL:0000134!6.15e-14!358;CL:0002320!2.35e-13!365;CL:0002393!2.99e-12!9;CL:0002397!2.99e-12!9;CL:0000219!2.60e-11!390;CL:0000034!7.85e-10!444;CL:0000048!1.87e-09!430;CL:0000723!4.19e-09!436;CL:0000767!7.72e-09!3;CL:0000094!3.73e-08!8;CL:0000842!3.76e-08!3;CL:0000623!1.38e-07!3;CL:0000825!1.38e-07!3 | |ontology_enrichment_celltype=CL:0002057!7.29e-57!42;CL:0000860!2.20e-52!45;CL:0000766!2.52e-49!76;CL:0000557!3.34e-45!71;CL:0000763!3.26e-42!112;CL:0000049!3.26e-42!112;CL:0002009!4.95e-42!65;CL:0000738!5.25e-41!140;CL:0000839!9.69e-41!70;CL:0002194!2.49e-38!63;CL:0000576!2.49e-38!63;CL:0000040!2.49e-38!63;CL:0000559!2.49e-38!63;CL:0000037!8.98e-38!172;CL:0000566!8.98e-38!172;CL:0000988!8.20e-35!182;CL:0002032!3.55e-32!165;CL:0000837!3.55e-32!165;CL:0002031!1.85e-29!124;CL:0002087!1.09e-27!119;CL:0000134!6.15e-14!358;CL:0002320!2.35e-13!365;CL:0002393!2.99e-12!9;CL:0002397!2.99e-12!9;CL:0000219!2.60e-11!390;CL:0000034!7.85e-10!444;CL:0000048!1.87e-09!430;CL:0000723!4.19e-09!436;CL:0000767!7.72e-09!3;CL:0000094!3.73e-08!8;CL:0000842!3.76e-08!3;CL:0000623!1.38e-07!3;CL:0000825!1.38e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.08e-45;33!CL:0002057;2.08e-45;33!CL:0000473;1.42e-33;39!CL:0000234;1.42e-33;39!CL:0000766;6.06e-32;69!CL:0000576;1.29e-31;48!CL:0000767;1.15e-19;3!CL:0000094;3.31e-19;8!CL:0000081;6.40e-14;11!CL:0001014;2.56e-13;2!CL:0001016;2.56e-13;2!CL:0000763;2.84e-13;100!CL:0000097;1.47e-11;5!CL:0002393;1.03e-09;6!CL:0002397;1.03e-09;6!CL:0000738;1.61e-09;136!CL:0000226;6.46e-09;3!CL:0000842;6.46e-09;3!CL:0002087;3.27e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.60e-60,72;CL:0000860,3.09e-54,42;CL:0002057,3.09e-54,42;CL:0000557,2.75e-51,67;CL:0000473,6.07e-47,48;CL:0000234,6.07e-47,48;CL:0000763,3.34e-45,108;CL:0000049,3.34e-45,108;CL:0000839,1.21e-43,66;CL:0002009,2.38e-43,61;CL:0000738,3.22e-40,136;CL:0002194,9.95e-37,59;CL:0000576,9.95e-37,59;CL:0000040,9.95e-37,59;CL:0000559,9.95e-37,59;CL:0000037,1.44e-31,168;CL:0000988,1.08e-29,177;CL:0002032,1.19e-28,161;CL:0000837,1.19e-28,161;CL:0002031,1.15e-26,120;CL:0002087,5.61e-21,115;CL:0000767,1.78e-19,3;CL:0000094,4.02e-19,8;CL:0000081,7.35e-14,11;CL:0001014,2.99e-13,2;CL:0001016,2.99e-13,2;CL:0000134,4.57e-12,354;CL:0002320,1.01e-11,361;CL:0000097,1.86e-11,5;CL:0002028,1.86e-11,5;CL:0000219,1.68e-10,386;CL:0000034,2.02e-09,441;CL:0000048,5.24e-09,427;CL:0000723,8.43e-09,433;CL:0000226,8.57e-09,3;CL:0000842,8.57e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.47e-45;42!CL:0000049;2.01e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.60e-41!80;UBERON:0001474!2.62e-37!86;UBERON:0002390!4.29e-37!102;UBERON:0003061!4.29e-37!102;UBERON:0002193!2.98e-34!112;UBERON:0004765!4.81e-30!101;UBERON:0001434!4.81e-30!101;UBERON:0002405!2.33e-26!115;UBERON:0003081!7.70e-17!216;UBERON:0002204!1.21e-14!167;UBERON:0002384!3.24e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.01e-44,76;UBERON:0001474,3.90e-41,82;UBERON:0002390,9.22e-40,98;UBERON:0003061,9.22e-40,98;UBERON:0004765,4.35e-37,90;UBERON:0002405,9.54e-36,93;UBERON:0002193,1.21e-35,108;UBERON:0001434,6.29e-33,100;UBERON:0002204,8.28e-18,167;UBERON:0003081,1.30e-16,203;UBERON:0002384,3.00e-11,371;UBERON:0000926,7.78e-09,315;UBERON:0004120,7.78e-09,315;UBERON:0006603,7.78e-09,315 | |||
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|short_description=p@chr19:6062297..6062310,- | |short_description=p@chr19:6062297..6062310,- | ||
}} | }} |
Latest revision as of 18:01, 27 July 2015
Short description: | p@chr19:6062297..6062310, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6062297..6062310, - |
Coexpression cluster: | C677_Basophils_CD14_Eosinophils_Neutrophils_CD34_Peripheral_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.01e-44 | 76 |
bone element | 3.90e-41 | 82 |
hematopoietic system | 9.22e-40 | 98 |
blood island | 9.22e-40 | 98 |
skeletal element | 4.35e-37 | 90 |
immune system | 9.54e-36 | 93 |
hemolymphoid system | 1.21e-35 | 108 |
skeletal system | 6.29e-33 | 100 |
musculoskeletal system | 8.28e-18 | 167 |
lateral plate mesoderm | 1.30e-16 | 203 |
connective tissue | 3.00e-11 | 371 |
mesoderm | 7.78e-09 | 315 |
mesoderm-derived structure | 7.78e-09 | 315 |
presumptive mesoderm | 7.78e-09 | 315 |