FFCP PHASE1:Hg19::chr19:6040212..6040256,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:6040212..6040256,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr19:6040212..6040256,- | |description=CAGE_peak_at_chr19:6040212..6040256,- | ||
|id=chr19:6040212..6040256,- | |id=chr19:6040212..6040256,- | ||
|ontology_enrichment_celltype=CL:0000860!1.42e-07!45;CL:0002057!2.10e-07!42;CL:0000557!5.82e-07!71 | |ontology_enrichment_celltype=CL:0000860!1.42e-07!45;CL:0002057!2.10e-07!42;CL:0000557!5.82e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002623;2.59e-12;3!CL:0000312;6.55e-08;5!CL:0000622;6.55e-08;5!CL:0000097;6.55e-08;5!CL:0000240;8.48e-07;6!CL:0000311;8.48e-07;6!CL:0000079;8.48e-07;6!CL:0000237;8.48e-07;6!CL:0000154;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.07e-12,3;CL:0000622,5.73e-08,5;CL:0000312,6.55e-08,5;CL:0000097,7.49e-08,5;CL:0002028,7.49e-08,5;CL:0000154,7.58e-07,6;CL:0000240,8.48e-07,6;CL:0000311,8.48e-07,6;CL:0000079,8.48e-07,6;CL:0000237,8.48e-07,6;CL:0000036,8.48e-07,6;CL:0000357,8.48e-07,6;CL:0000114,8.48e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.84e-14;10!UBERON:0005564;2.84e-14;10!CL:0000357;8.48e-07;6!CL:0000114;8.48e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.44e-17;8!UBERON:0003135;4.52e-13;11!UBERON:0000991;2.60e-07;21!UBERON:0003101;5.09e-07;22!UBERON:0000079;5.09e-07;22!UBERON:0001044;8.48e-07;6!UBERON:0003293;8.48e-07;6!UBERON:0003294;8.48e-07;6!UBERON:0010047;8.48e-07;6!UBERON:0003408;8.48e-07;6!UBERON:0000167;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.57e-17,8;UBERON:0003135,4.80e-13,11;UBERON:0000991,2.69e-07,21;UBERON:0009196,2.69e-07,21;UBERON:0009117,2.69e-07,21;UBERON:0005564,2.69e-07,21;UBERON:0004176,5.24e-07,22;UBERON:0003101,5.24e-07,22;UBERON:0000079,5.24e-07,22;UBERON:0001044,7.58e-07,6;UBERON:0003293,7.58e-07,6;UBERON:0003294,7.58e-07,6;UBERON:0010047,7.58e-07,6;UBERON:0000167,7.58e-07,6 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581592955118259,0,0.242584061187816,0.464858073811369,0,0,0.575384784644301,0,0.236482229888585,0.344745680736619,0,1.35426486594342,0.376484679085209,0,0,0.612167784741805,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.432359860250884,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0.321176150207399,0,0.425846237690326,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0,0,0,0.269272933229316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0.300646838828985,0,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0.0730893170861856,0,0.0969890164884194,0.176512253383001,0.225980740780532,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0.449947783103001,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38251932362818,0,0,0.0852134047591577,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0.940634592723046,0.490296643507811,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82008283964155,1.07185652062471,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581592955118259,0,0.242584061187816,0.464858073811369,0,0,0.575384784644301,0,0.236482229888585,0.344745680736619,0,1.35426486594342,0.376484679085209,0,0,0.612167784741805,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.432359860250884,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0.321176150207399,0,0.425846237690326,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0,0,0,0.269272933229316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0.300646838828985,0,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0.0730893170861856,0,0.0969890164884194,0.176512253383001,0.225980740780532,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0.449947783103001,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38251932362818,0,0,0.0852134047591577,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0.940634592723046,0.490296643507811,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82008283964155,1.07185652062471,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr19:6040212..6040256,- | |short_description=p@chr19:6040212..6040256,- | ||
}} | }} |
Latest revision as of 18:01, 27 July 2015
Short description: | p@chr19:6040212..6040256, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6040212..6040256, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.07e-12 | 3 |
acinar cell | 5.73e-08 | 5 |
keratinocyte | 6.55e-08 | 5 |
mast cell | 7.49e-08 | 5 |
basophil mast progenitor cell | 7.49e-08 | 5 |
protein secreting cell | 7.58e-07 | 6 |
stratified squamous epithelial cell | 8.48e-07 | 6 |
keratin accumulating cell | 8.48e-07 | 6 |
stratified epithelial cell | 8.48e-07 | 6 |
keratinizing barrier epithelial cell | 8.48e-07 | 6 |
epithelial fate stem cell | 8.48e-07 | 6 |
stratified epithelial stem cell | 8.48e-07 | 6 |
surface ectodermal cell | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 1.57e-17 | 8 |
male reproductive organ | 4.80e-13 | 11 |
gonad | 2.69e-07 | 21 |
indifferent external genitalia | 2.69e-07 | 21 |
indifferent gonad | 2.69e-07 | 21 |
gonad primordium | 2.69e-07 | 21 |
external genitalia | 5.24e-07 | 22 |
male organism | 5.24e-07 | 22 |
male reproductive system | 5.24e-07 | 22 |
saliva-secreting gland | 7.58e-07 | 6 |
gland of oral region | 7.58e-07 | 6 |
gland of foregut | 7.58e-07 | 6 |
oral gland | 7.58e-07 | 6 |
oral cavity | 7.58e-07 | 6 |