FFCP PHASE1:Hg19::chr19:56029117..56029151,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:56029117..56029151,+
|short_description=p@chr19:56029117..56029151,+
|description=CAGE_peak_at_chr19:56029117..56029151,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:56029117..56029151,+ | |||
|coexpression_cluster_id=C1063 | |||
|description=CAGE_peak_at_chr19:56029117..56029151,+ | |||
|id=chr19:56029117..56029151,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.92e-10!180;CL:0000057!8.64e-10!75;CL:0002620!4.60e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;7.73e-10;23!CL:0000134;1.36e-08;55!CL:0000048;6.68e-08;58!CL:0002334;1.08e-07;12!CL:0000723;1.89e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.16e-11,76;CL:0002620,9.51e-10,23;CL:0002334,5.30e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.89e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.12e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.34e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.46e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.66e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,9.83e-09,46;UBERON:0002416,9.83e-09,46;UBERON:0001013,1.75e-07,14 | |||
|phase1_expression=0.908391896352783,5.99481466894753,1.69145284915165,0,0.446961094427288,0,2.53299878168311,3.79031924056099,5.74608382039645,0.245733936501509,0,0.218441372130172,0.527533956456907,2.10402800032079,3.64537113300707,2.6893005858071,5.42425075221579,0.730310090387373,1.46379839637152,1.47745269692145,0.408001382488506,2.5076377718247,0,0,0.251085279189606,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0.580418477257168,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0.144824403882799,4.87613732627923,2.68280343881454,0.639312809217652,17.7105184668437,2.50668955317945,29.548689868008,2.3858578411533,2.91980922181582,0.661743720148475,0.221729397462564,0.966182642624386,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,12.9212707440783,0.25326102332916,1.05927344650575,11.1866282092037,3.90135220418193,0,0,1.2333377420858,0,0,0.326923806226917,0.302714855289863,0,0,0.936480230490962,0.570471821544449,10.1625102775225,0,0,0,0.408308342509787,0.122834317311768,0.309977343527296,0,4.45080472701402,0.910161361938026,0,0.168336113954066,0,0,0.438977620880838,1.22595118319608,0.45071417671979,0.340296549480063,29.0611209815956,8.96941033037983,6.56988893594642,9.30282397861647,2.16410311400722,35.5543945262968,10.0503102419058,24.8101208394661,4.87185025805993,30.5444866835379,2.11714766877288,4.20279747728911,27.3357386237793,2.11579406278045,4.91725717700414,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.414644220061482,0.504641701751257,0.72995471815166,0,13.5080597020506,0,6.50115099244771,2.88751792667834,0,0,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0.8231480226628,4.41026134156626,0,0,1.77236972004421,0,0,3.43135620597051,0,0,0,0,0.651616610620649,0,0,2.20267769452646,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,7.38994856843915,0.352193736052904,0.414656231081544,0,0.12624243342638,0.571481048629521,0,0,0,0.616964956219941,7.80891950394185,0.285826432630578,0.112131084345361,0,1.1734125731352,1.03417372606222,14.3062578340753,7.607724773004,7.1803291477915,4.16029747645464,0.257207374262142,1.41849132023278,0.799266537048298,5.29018576535146,4.88359444852299,0,0.325736184293735,1.42156779497018,0,3.61727252471503,0.871533458600294,17.9951384127703,0,0,0,0,1.14861935834114,0,0.434343920002738,0.821905290201534,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0,0,0,0,0,6.87072353627183,3.00102312635806,0.813795071099207,2.70362119990049,17.3076119133247,2.52323864054295,12.4169899892276,0,0,2.0694614258501,8.63493278096067,0,5.12613325361689,5.48243240895674,5.83343820478455,0,0,0,0,0,1.20956117331872,1.24053903909388,6.1384789315225,8.41980283299221,1.92208723883551,1.53512174720011,4.82561763430822,0,4.1636617326717,4.97172830876756,1.97105174433142,4.67328986265259,1.97557643381931,0,0,0,0.229628896329213,0.364182336013434,1.18011973463482,0,0.308061348417659,0.784349769176855,1.46139224653261,0.422206515571503,0,0,0.863663664408557,0,1.62567862526312,2.50844886927427,0.254876273045038,0,0.895499018888713,0,0,0,0,0,0,0.0915694648183434,0,0,0,4.82051789532479,1.54673149267395,0,0.307007349452259,0,1.93356440762893,0.145016693914229,0.340906509664404,5.07482603186403,0,0,0.127612712494584,0,6.04299214086472,24.8701753996206,0,1.23213432070436,0,0,0,0,0,0,0.571890581771475,0.511795582622668,2.99557291623744,0,0,0.359744915166629,0.54907405947211,0,0,0,0,0.48763373908959,3.41198885483798,0,1.77449884830381,5.93902814205594,1.13008116620243,0,1.32687795048244,0,1.73632660280006,1.9676842561399,0,0.30982349809975,0,0.430234056612155,0.294747123039363,0,1.41904425628239,10.9775970354785,17.7819242198347,0,0,0,0,0,0.470719003883896,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0.185803175125719,0,0,0,0,0,3.59845090630601,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0.556812347790485,0,0,0.99921590399346,0,0,1.17206543417515,0,0.111443384277478,0,0,0,0,0,0.703347082052564,0.222617410045812,0,0,4.38345574152353,0.552567831062295,0,0.613612095012929,0.123084805461069,0.622079175323615,0,0,0,2.36744173528641,0,0,0,0.463840490809256,0,0.260427761085233,0,0,0,0,0,0,0.291604613383254,0,1.77148277162768,0.723578631752448,0,1.43753037910592,1.77328571372128,0.219385397153973,0,0,5.92516990479237,0,0,0,0,0,0.824378340616761,0,0,1.09886179476517,0,0,0,0,0,0.317873157960757,0,0,0,0,3.98104772431402,0.796118080530053,0,0,0.247127877893006,0.208843899010911,0.606610196826093,5.61804353109152,0.468528891450678,0,0,0.242780379534093,3.15667522279512,0,0.918218284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| ||
|short_description=p@chr19:56029117..56029151,+ | |||
}} | }} |
Latest revision as of 17:32, 27 July 2015
Short description: | p@chr19:56029117..56029151, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:56029117..56029151, + |
Coexpression cluster: | C1063_tenocyte_Mesenchymal_Fibroblast_Chondrocyte_mesenchymal_Olfactory_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.16e-11 | 76 |
skin fibroblast | 9.51e-10 | 23 |
preadipocyte | 5.30e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
integument | 9.83e-09 | 46 |
integumental system | 9.83e-09 | 46 |
adipose tissue | 1.75e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.34e-11 | 14 |