FFCP PHASE1:Hg19::chr19:55896758..55896764,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:55896758..55896764,- | |||
|description=CAGE_peak_at_chr19:55896758..55896764,- | |description=CAGE_peak_at_chr19:55896758..55896764,- | ||
|id=chr19:55896758..55896764,- | |id=chr19:55896758..55896764,- | ||
|ontology_enrichment_celltype=CL:0000066!2.04e-07!254 | |ontology_enrichment_celltype=CL:0000066!2.04e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000167;4.76e-13;1!CL:0000164;4.76e-13;1!CL:0000502;4.76e-13;1!CL:0000172;4.76e-13;1!CL:0002553;4.76e-13;1!CL:0000173;4.76e-13;1!CL:0002545;3.69e-07;2 | |ontology_enrichment_celltype_v019=CL:0000167;4.76e-13;1!CL:0000164;4.76e-13;1!CL:0000502;4.76e-13;1!CL:0000172;4.76e-13;1!CL:0002553;4.76e-13;1!CL:0000173;4.76e-13;1!CL:0002545;3.69e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.95e-13,1;CL:0000167,4.77e-13,1;CL:0000164,4.77e-13,1;CL:0000502,4.77e-13,1;CL:0000172,4.77e-13,1;CL:0000173,4.77e-13,1;CL:0002351,4.77e-13,1;CL:0002545,2.74e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002351;4.76e-13;1!UBERON:0010122;3.69e-07;2 | |ontology_enrichment_development_v019=CL:0002351;4.76e-13;1!UBERON:0010122;3.69e-07;2 | ||
|ontology_enrichment_disease=DOID:162!5.13e-10!235;DOID:14566!1.09e-09!239;DOID:305!2.18e-08!106 | |ontology_enrichment_disease=DOID:162!5.13e-10!235;DOID:14566!1.09e-09!239;DOID:305!2.18e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:5093;4.23e-13;4!DOID:1612;4.23e-13;4!DOID:4430;4.76e-13;1 | |ontology_enrichment_disease_v019=DOID:5093;4.23e-13;4!DOID:1612;4.23e-13;4!DOID:4430;4.76e-13;1 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,4.24e-13,4;DOID:1612,4.24e-13,4;DOID:4430,4.77e-13,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001873;3.69e-07;2!UBERON:0005800;3.69e-07;2!UBERON:0001515;3.69e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001873;3.69e-07;2!UBERON:0005800;3.69e-07;2!UBERON:0001515;3.69e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,2.43e-07,2;UBERON:0010122,2.43e-07,2;UBERON:0005800,2.74e-07,2;UBERON:0001515,2.74e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0.547497700291537,0.125542639594803,1.14620108621927,0.903106483949403,1.10195093839151,0.393364276848904,0,0,0,0.30120591877825,0,0.309868802321207,0.142169232487422,0,0,0,0.217010870715852,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0,0,0,0.275118041940067,0.626984899610432,0.258416759169329,0,0,0,0,0,0,1.62028389576352,0.0892997282840798,0.22452937262617,0.337834441449967,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0.468642863667593,0,0.570471821544449,0,0.117434498643765,0,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0.193260853163297,0.272746120590835,0,0.121973706129595,0.132529768321485,0.232387885739037,0,0.252320850875628,0.72995471815166,0,0,0,0,0,0.828147600278907,0.842923450390509,0.241011029883482,0.441175890929576,0.653638332277218,0,0.404493924480493,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.402115889646523,0,0,0,1.44331342025273,0,0.117408694235822,0.144366447761074,0,0,2.37061319387782,3.43394464837949,0,0,0,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0.414656231081544,0.144119953416961,0,0,0,0,1.71072446022705,0.308482478109971,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.385029108839245,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,0,0,0,1.54227252690289,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0.366277859273374,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0.379473173765715,0,0.0962221127255121,0,1.08890984861323,0,0,0,0.443430153536676,0.229723400206959,0,0.764637207142375,0.569647187174163,0,0,0,0,0,0,0,0,0,0.28853842595289,0.142283686696828,0,0.59873811429845,0.191505370132367,0.635020748171649,0,0.561594356226918,0,0.626719583092093,0,0,0.642352300414798,0.80719882876419,0.425846237690326,0,0,0,0,0.19538809540204,0.556812347790485,0,0,0,0,0.37428108081644,0.146508179271894,0.242721043499027,0.111443384277478,0,0,0,0,0,0.281338832821026,0.222617410045812,0.824019371133798,0,0,0.276283915531148,0.251932747854276,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0.291604613383254,0.173624994933292,1.77148277162768,0.120596438625408,0,0.552896299656123,0.295547618953547,0,0.435753854075961,0,0.0769502585037971,0.341826167541004,0.23056390438806,0.0897576444097721,0,0,0.0915975934018623,0,1.02193298195737,0.470940769185074,0.332423363800313,0,0.392125068635479,0.839107934879214,0.37950746544837,0,0.210998064528027,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.522109747527277,0,0,0,0.364909578431332,0,0,0,0,0,0,0.450970258243478,0.622129148383483,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,1.45134496933628,0.803982487948041,0.985385484638511,0.0969890164884194,0,0,0.137041924646751,0.397429223405979,0,0.391102765469606,0.0801588202515337,0,0,0.576361668616424,0.114536596165916,0,0.288109595976299,0,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0.599037001496973,0,0,0,0,0,0.157566364614447,0.164831716762333,0.13480708770837,0,0.338693328263138,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0.410462603746695,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0.106787412567695,0,0.414239055347196,0,0.592834895693833,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0.1251909307065,0,0.332787154610557,0,0.415045904808692,0.124980407962107,0,0,0,0.936669811613763,0.724605143054126,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0.353378291891762,0,0,0,0,0,0.138258436151731,0,0.132864840313363,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|short_description=p@chr19:55896758..55896764,- | |short_description=p@chr19:55896758..55896764,- | ||
}} | }} |
Latest revision as of 17:28, 27 July 2015
Short description: | p@chr19:55896758..55896764, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:55896758..55896764, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.95e-13 | 1 |
peptide hormone secreting cell | 4.77e-13 | 1 |
enteroendocrine cell | 4.77e-13 | 1 |
type D enteroendocrine cell | 4.77e-13 | 1 |
somatostatin secreting cell | 4.77e-13 | 1 |
pancreatic D cell | 4.77e-13 | 1 |
progenitor cell of endocrine pancreas | 4.77e-13 | 1 |
thoracic aorta endothelial cell | 2.74e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 2.43e-07 | 2 |
future caudate nucleus | 2.43e-07 | 2 |
segment of aorta | 2.74e-07 | 2 |
thoracic aorta | 2.74e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.24e-13 | 4 |
breast cancer | 4.24e-13 | 4 |
somatostatinoma | 4.77e-13 | 1 |