FFCP PHASE1:Hg19::chr19:55668488..55668506,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:55668488..55668506,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr19:55668488..55668506,- | |||
|id=chr19:55668488..55668506,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.25e-45;4!UBERON:0007284;8.25e-45;4!UBERON:0010226;1.88e-21;1!UBERON:0010227;3.45e-21;1!UBERON:0000358;7.72e-21;1!UBERON:0004140;7.72e-21;1!UBERON:0006603;5.50e-09;65 | |||
|ontology_enrichment_disease=DOID:114!1.00e-31!2;DOID:178!1.21e-16!1;DOID:326!1.21e-16!1;DOID:3978!1.21e-16!1;DOID:3394!1.21e-16!1;DOID:5844!1.21e-16!1;DOID:1287!2.09e-16!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.49e-40;2!DOID:178;4.67e-21;1!DOID:326;4.67e-21;1!DOID:3978;4.67e-21;1!DOID:3394;4.67e-21;1!DOID:5844;4.67e-21;1!DOID:1287;7.36e-21;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.64e-40,2;DOID:178,5.16e-21,1;DOID:326,5.16e-21,1;DOID:3978,5.16e-21,1;DOID:3394,5.16e-21,1;DOID:5844,5.16e-21,1;DOID:1287,7.74e-21,4 | |||
|ontology_enrichment_uberon=UBERON:0004151!1.65e-46!3;UBERON:0003978!2.62e-46!3;UBERON:0009751!2.62e-46!3;UBERON:0000946!2.62e-46!3;UBERON:0002523!2.62e-46!3;UBERON:0005983!2.62e-46!3;UBERON:0002165!2.62e-46!3;UBERON:0002062!2.62e-46!3;UBERON:0007280!2.62e-46!3;UBERON:0007100!3.40e-45!27;UBERON:0002081!2.18e-31!2;UBERON:0002133!2.54e-31!2;UBERON:0000948!8.87e-23!24;UBERON:0005498!8.87e-23!24;UBERON:0004140!8.87e-23!24;UBERON:0009881!8.87e-23!24;UBERON:0004141!8.87e-23!24;UBERON:0003084!8.87e-23!24;UBERON:0007005!8.87e-23!24;UBERON:0004139!8.87e-23!24;UBERON:0004291!8.87e-23!24;UBERON:0003103!2.74e-17!69;UBERON:0002084!5.53e-17!1;UBERON:0002082!5.53e-17!1;UBERON:0004706!5.53e-17!1;UBERON:0002146!7.57e-17!1;UBERON:0005623!7.57e-17!1;UBERON:0002079!8.86e-17!1;UBERON:0002135!1.04e-16!1;UBERON:0002134!1.93e-16!1;UBERON:0005208!1.93e-16!1;UBERON:0005946!1.93e-16!1;UBERON:0005965!1.93e-16!1;UBERON:0002078!1.93e-16!1;UBERON:0007029!2.25e-16!1;UBERON:0002342!1.78e-10!14;UBERON:0005062!1.78e-10!14;UBERON:0001009!3.03e-10!113;UBERON:0007023!6.12e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.85e-63;25!UBERON:0004151;9.99e-60;3!UBERON:0003978;2.02e-59;3!UBERON:0000946;2.02e-59;3!UBERON:0002081;3.67e-40;2!UBERON:0002133;4.96e-40;2!UBERON:0000948;3.32e-32;22!UBERON:0002084;1.88e-21;1!UBERON:0002082;1.88e-21;1!UBERON:0002146;2.82e-21;1!UBERON:0005623;2.82e-21;1!UBERON:0002079;3.45e-21;1!UBERON:0002135;4.67e-21;1!UBERON:0002134;7.72e-21;1!UBERON:0005208;7.72e-21;1!UBERON:0004145;7.72e-21;1!UBERON:0005946;7.72e-21;1!UBERON:0005965;7.72e-21;1!UBERON:0002078;7.72e-21;1!UBERON:0010313;2.00e-18;10!UBERON:0003103;7.09e-13;61!UBERON:0001009;3.30e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.22e-59,3;UBERON:0003978,2.23e-59,3;UBERON:0009751,2.23e-59,3;UBERON:0000946,2.23e-59,3;UBERON:0002523,2.23e-59,3;UBERON:0005983,2.23e-59,3;UBERON:0002165,2.23e-59,3;UBERON:0002062,2.23e-59,3;UBERON:0007280,2.23e-59,3;UBERON:0007100,1.00e-58,27;UBERON:0002081,4.49e-40,2;UBERON:0010227,4.49e-40,2;UBERON:0002133,5.49e-40,2;UBERON:0000948,1.60e-29,24;UBERON:0005498,1.60e-29,24;UBERON:0004140,1.60e-29,24;UBERON:0009881,1.60e-29,24;UBERON:0004141,1.60e-29,24;UBERON:0003084,1.60e-29,24;UBERON:0007005,1.60e-29,24;UBERON:0004139,1.60e-29,24;UBERON:0004291,1.60e-29,24;UBERON:0004797,5.78e-26,7;UBERON:0003103,3.31e-23,68;UBERON:0002084,1.88e-21,1;UBERON:0002082,1.88e-21,1;UBERON:0010226,1.88e-21,1;UBERON:0002146,2.82e-21,1;UBERON:0005623,2.82e-21,1;UBERON:0002079,3.45e-21,1;UBERON:0002135,4.22e-21,1;UBERON:0002134,9.43e-21,1;UBERON:0005208,9.43e-21,1;UBERON:0005946,9.43e-21,1;UBERON:0005965,9.43e-21,1;UBERON:0002078,9.43e-21,1;UBERON:0010313,2.06e-18,10;UBERON:0002342,2.06e-18,10;UBERON:0005062,2.06e-18,10;UBERON:0001009,5.94e-14,112;UBERON:0007023,7.89e-11,114;UBERON:0004872,1.64e-08,83;UBERON:0004145,8.29e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35138881526705,7.79145441639724,2.15361907373044,3.19486400798386,8.58452096273142,14.9524876486055,2.28423806454869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2881719582402,11.9176554665778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr19:55668488..55668506,- | |||
}} |
Latest revision as of 17:22, 27 July 2015
Short description: | p@chr19:55668488..55668506, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:55668488..55668506, - |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.64e-40 | 2 |
vascular disease | 5.16e-21 | 1 |
ischemia | 5.16e-21 | 1 |
extrinsic cardiomyopathy | 5.16e-21 | 1 |
myocardial ischemia | 5.16e-21 | 1 |
myocardial infarction | 5.16e-21 | 1 |
cardiovascular system disease | 7.74e-21 | 4 |