FFCP PHASE1:Hg19::chr19:54887674..54887700,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:54887674..54887700,- | |||
|coexpression_cluster_id=C687 | |||
|description=CAGE_peak_at_chr19:54887674..54887700,- | |description=CAGE_peak_at_chr19:54887674..54887700,- | ||
|id=chr19:54887674..54887700,- | |id=chr19:54887674..54887700,- | ||
|ontology_enrichment_celltype=CL:0002057!9.34e-56!42;CL:0002194!3.37e-55!63;CL:0000576!3.37e-55!63;CL:0000040!3.37e-55!63;CL:0000559!3.37e-55!63;CL:0002009!5.46e-53!65;CL:0000766!6.12e-53!76;CL:0000839!6.93e-52!70;CL:0000860!4.48e-51!45;CL:0000557!6.51e-51!71;CL:0000763!3.10e-41!112;CL:0000049!3.10e-41!112;CL:0000738!1.39e-27!140;CL:0000037!2.49e-26!172;CL:0000566!2.49e-26!172;CL:0002087!2.57e-26!119;CL:0002031!3.10e-24!124;CL:0000988!9.35e-24!182;CL:0002032!9.61e-24!165;CL:0000837!9.61e-24!165;CL:0002393!1.26e-09!9;CL:0002397!1.26e-09!9 | |ontology_enrichment_celltype=CL:0002057!9.34e-56!42;CL:0002194!3.37e-55!63;CL:0000576!3.37e-55!63;CL:0000040!3.37e-55!63;CL:0000559!3.37e-55!63;CL:0002009!5.46e-53!65;CL:0000766!6.12e-53!76;CL:0000839!6.93e-52!70;CL:0000860!4.48e-51!45;CL:0000557!6.51e-51!71;CL:0000763!3.10e-41!112;CL:0000049!3.10e-41!112;CL:0000738!1.39e-27!140;CL:0000037!2.49e-26!172;CL:0000566!2.49e-26!172;CL:0002087!2.57e-26!119;CL:0002031!3.10e-24!124;CL:0000988!9.35e-24!182;CL:0002032!9.61e-24!165;CL:0000837!9.61e-24!165;CL:0002393!1.26e-09!9;CL:0002397!1.26e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.46e-77;39!CL:0000234;1.46e-77;39!CL:0000860;1.22e-74;33!CL:0002057;1.22e-74;33!CL:0000576;1.31e-47;48!CL:0000766;6.04e-32;69!CL:0000763;3.42e-20;100!CL:0000235;8.00e-20;6!CL:0002619;9.18e-16;3!CL:0000784;2.58e-14;3!CL:0002087;4.13e-13;104!CL:0000738;8.17e-11;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.48e-90,59;CL:0000576,4.48e-90,59;CL:0000040,4.48e-90,59;CL:0000559,4.48e-90,59;CL:0000473,2.50e-88,48;CL:0000234,2.50e-88,48;CL:0002009,6.17e-87,61;CL:0000839,6.59e-80,66;CL:0000557,1.26e-78,67;CL:0000766,9.63e-73,72;CL:0000860,2.20e-70,42;CL:0002057,2.20e-70,42;CL:0000763,1.70e-55,108;CL:0000049,1.70e-55,108;CL:0002087,4.60e-43,115;CL:0002031,5.58e-41,120;CL:0000738,4.68e-40,136;CL:0000037,2.80e-37,168;CL:0000988,5.31e-35,177;CL:0002032,7.57e-35,161;CL:0000837,7.57e-35,161;CL:0000235,7.72e-20,6;CL:0002619,8.34e-16,3;CL:0000784,3.74e-14,3;CL:0000134,1.34e-13,354;CL:0002320,3.52e-13,361;CL:0000219,1.05e-11,386;CL:0000034,3.98e-10,441;CL:0000048,6.76e-10,427;CL:0000723,1.20e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.11e-52;42!CL:0000049;9.30e-17;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.96e-43!80;UBERON:0002390!1.62e-42!102;UBERON:0003061!1.62e-42!102;UBERON:0001474!4.78e-39!86;UBERON:0002193!1.97e-38!112;UBERON:0004765!4.48e-32!101;UBERON:0001434!4.48e-32!101;UBERON:0002405!3.84e-31!115;UBERON:0007023!2.97e-21!115;UBERON:0002204!2.06e-14!167;UBERON:0003081!2.88e-13!216;UBERON:0001049!1.58e-11!57;UBERON:0005068!1.58e-11!57;UBERON:0006241!1.58e-11!57;UBERON:0007135!1.58e-11!57;UBERON:0002780!1.97e-10!41;UBERON:0001890!1.97e-10!41;UBERON:0006240!1.97e-10!41;UBERON:0003080!4.67e-10!42;UBERON:0002616!8.52e-10!59;UBERON:0002020!1.72e-09!34;UBERON:0003528!1.72e-09!34;UBERON:0001893!1.88e-09!34;UBERON:0002308!4.73e-09!9;UBERON:0000125!4.73e-09!9;UBERON:0002791!9.37e-09!33;UBERON:0000062!1.44e-08!511;UBERON:0000955!5.57e-08!69;UBERON:0006238!5.57e-08!69;UBERON:0001869!7.20e-08!32;UBERON:0005743!3.08e-07!86;UBERON:0001017!3.41e-07!82;UBERON:0002420!3.44e-07!9;UBERON:0007245!3.44e-07!9;UBERON:0010009!3.44e-07!9;UBERON:0010011!3.44e-07!9;UBERON:0000454!3.44e-07!9;UBERON:0009663!4.92e-07!7;UBERON:0003075!8.91e-07!86;UBERON:0007284!8.91e-07!86 | |ontology_enrichment_uberon=UBERON:0002371!2.96e-43!80;UBERON:0002390!1.62e-42!102;UBERON:0003061!1.62e-42!102;UBERON:0001474!4.78e-39!86;UBERON:0002193!1.97e-38!112;UBERON:0004765!4.48e-32!101;UBERON:0001434!4.48e-32!101;UBERON:0002405!3.84e-31!115;UBERON:0007023!2.97e-21!115;UBERON:0002204!2.06e-14!167;UBERON:0003081!2.88e-13!216;UBERON:0001049!1.58e-11!57;UBERON:0005068!1.58e-11!57;UBERON:0006241!1.58e-11!57;UBERON:0007135!1.58e-11!57;UBERON:0002780!1.97e-10!41;UBERON:0001890!1.97e-10!41;UBERON:0006240!1.97e-10!41;UBERON:0003080!4.67e-10!42;UBERON:0002616!8.52e-10!59;UBERON:0002020!1.72e-09!34;UBERON:0003528!1.72e-09!34;UBERON:0001893!1.88e-09!34;UBERON:0002308!4.73e-09!9;UBERON:0000125!4.73e-09!9;UBERON:0002791!9.37e-09!33;UBERON:0000062!1.44e-08!511;UBERON:0000955!5.57e-08!69;UBERON:0006238!5.57e-08!69;UBERON:0001869!7.20e-08!32;UBERON:0005743!3.08e-07!86;UBERON:0001017!3.41e-07!82;UBERON:0002420!3.44e-07!9;UBERON:0007245!3.44e-07!9;UBERON:0010009!3.44e-07!9;UBERON:0010011!3.44e-07!9;UBERON:0000454!3.44e-07!9;UBERON:0009663!4.92e-07!7;UBERON:0003075!8.91e-07!86;UBERON:0007284!8.91e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-68,76;UBERON:0001474,4.22e-63,82;UBERON:0004765,6.53e-57,90;UBERON:0002405,7.33e-55,93;UBERON:0002390,1.01e-51,98;UBERON:0003061,1.01e-51,98;UBERON:0001434,1.50e-50,100;UBERON:0002193,2.66e-46,108;UBERON:0002204,1.91e-27,167;UBERON:0003081,2.75e-21,203;UBERON:0002384,1.31e-12,371;UBERON:0000926,5.03e-12,315;UBERON:0004120,5.03e-12,315;UBERON:0006603,5.03e-12,315 | |||
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|short_description=p@chr19:54887674..54887700,- | |short_description=p@chr19:54887674..54887700,- | ||
}} | }} |
Latest revision as of 17:14, 27 July 2015
Short description: | p@chr19:54887674..54887700, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:54887674..54887700, - |
Coexpression cluster: | C687_CD14_Macrophage_Monocytederived_Dendritic_Endothelial_Pericytes_schwannoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.38e-68 | 76 |
bone element | 4.22e-63 | 82 |
skeletal element | 6.53e-57 | 90 |
immune system | 7.33e-55 | 93 |
hematopoietic system | 1.01e-51 | 98 |
blood island | 1.01e-51 | 98 |
skeletal system | 1.50e-50 | 100 |
hemolymphoid system | 2.66e-46 | 108 |
musculoskeletal system | 1.91e-27 | 167 |
lateral plate mesoderm | 2.75e-21 | 203 |
connective tissue | 1.31e-12 | 371 |
mesoderm | 5.03e-12 | 315 |
mesoderm-derived structure | 5.03e-12 | 315 |
presumptive mesoderm | 5.03e-12 | 315 |