FFCP PHASE1:Hg19::chr19:54692373..54692384,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:54692373..54692384,+ | |||
|coexpression_cluster_id=C692 | |||
|description=CAGE_peak_at_chr19:54692373..54692384,+ | |description=CAGE_peak_at_chr19:54692373..54692384,+ | ||
|id=chr19:54692373..54692384,+ | |id=chr19:54692373..54692384,+ | ||
|ontology_enrichment_celltype=CL:0000766!3.96e-17!76;CL:0000094!5.28e-17!8;CL:0000081!1.41e-15!11;CL:0000763!1.37e-14!112;CL:0000049!1.37e-14!112;CL:0002274!2.20e-14!5;CL:0000457!2.20e-14!5;CL:0002191!2.20e-14!5;CL:0000097!2.20e-14!5;CL:0000831!2.20e-14!5;CL:0002028!2.20e-14!5;CL:0000988!7.43e-11!182;CL:0000163!1.05e-10!9;CL:0000037!2.43e-10!172;CL:0000566!2.43e-10!172;CL:0002032!1.54e-09!165;CL:0000837!1.54e-09!165;CL:0000775!1.78e-09!3;CL:0000738!3.68e-09!140;CL:0000839!6.90e-09!70;CL:0000557!1.07e-08!71;CL:0000860!2.40e-08!45;CL:0002057!6.65e-08!42;CL:0000771!5.63e-07!2 | |ontology_enrichment_celltype=CL:0000766!3.96e-17!76;CL:0000094!5.28e-17!8;CL:0000081!1.41e-15!11;CL:0000763!1.37e-14!112;CL:0000049!1.37e-14!112;CL:0002274!2.20e-14!5;CL:0000457!2.20e-14!5;CL:0002191!2.20e-14!5;CL:0000097!2.20e-14!5;CL:0000831!2.20e-14!5;CL:0002028!2.20e-14!5;CL:0000988!7.43e-11!182;CL:0000163!1.05e-10!9;CL:0000037!2.43e-10!172;CL:0000566!2.43e-10!172;CL:0002032!1.54e-09!165;CL:0000837!1.54e-09!165;CL:0000775!1.78e-09!3;CL:0000738!3.68e-09!140;CL:0000839!6.90e-09!70;CL:0000557!1.07e-08!71;CL:0000860!2.40e-08!45;CL:0002057!6.65e-08!42;CL:0000771!5.63e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000094;2.32e-52;8!CL:0000097;1.35e-38;5!CL:0000081;4.73e-38;11!CL:0000775;1.04e-35;3!CL:0000771;5.92e-25;2!CL:0000163;1.28e-21;9!CL:0000766;1.06e-12;69!CL:0000763;1.89e-09;100!CL:0000047;4.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.86e-52,8;CL:0000097,1.29e-38,5;CL:0002028,1.29e-38,5;CL:0000081,4.03e-38,11;CL:0000775,9.82e-36,3;CL:0000766,1.00e-29,72;CL:0000771,6.29e-25,2;CL:0000163,1.25e-21,9;CL:0000763,2.47e-19,108;CL:0000049,2.47e-19,108;CL:0000738,5.19e-15,136;CL:0002032,2.09e-12,161;CL:0000837,2.09e-12,161;CL:0000037,8.18e-12,168;CL:0000988,4.04e-11,177;CL:0000839,2.18e-10,66;CL:0000557,3.19e-10,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.85e-13!102;UBERON:0003061!6.85e-13!102;UBERON:0002193!3.88e-12!112;UBERON:0002371!3.54e-08!80;UBERON:0000178!8.75e-08!15;UBERON:0000179!8.75e-08!15;UBERON:0000463!8.75e-08!15;UBERON:0001474!2.79e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.48e-10,98;UBERON:0003061,1.48e-10,98;UBERON:0002193,1.81e-09,108;UBERON:0002371,6.33e-09,76;UBERON:0001474,3.24e-08,82;UBERON:0004765,2.05e-07,90;UBERON:0002405,3.78e-07,93 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.96682138424452,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0.929119112685311,0.28769239232215,0,0.47296445977717,0,0,4.06279459783025,0.188242339542605,0,0.449446968890169,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0.75374599577023,1.0429658368404,1.3031330682307,1.21079900526674,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,9.22462922052443,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,9.36060152002293,0.176096868026452,11.1957182392017,9.94427678577034,14.5178798440337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,3.74503511973591,2.99161459204025,6.21623270154053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.02979043692868,0,1.13929437434833,0.476463550915578,0,0.648473311192717,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.31037357147929,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:54692373..54692384,+ | |short_description=p@chr19:54692373..54692384,+ | ||
}} | }} |
Latest revision as of 17:09, 27 July 2015
Short description: | p@chr19:54692373..54692384, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:54692373..54692384, + |
Coexpression cluster: | C692_Mast_Eosinophils_Neutrophils_Basophils_immature_CD4_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.86e-52 | 8 |
mast cell | 1.29e-38 | 5 |
basophil mast progenitor cell | 1.29e-38 | 5 |
blood cell | 4.03e-38 | 11 |
neutrophil | 9.82e-36 | 3 |
myeloid leukocyte | 1.00e-29 | 72 |
eosinophil | 6.29e-25 | 2 |
endocrine cell | 1.25e-21 | 9 |
myeloid cell | 2.47e-19 | 108 |
common myeloid progenitor | 2.47e-19 | 108 |
leukocyte | 5.19e-15 | 136 |
hematopoietic oligopotent progenitor cell | 2.09e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-12 | 161 |
hematopoietic stem cell | 8.18e-12 | 168 |
hematopoietic cell | 4.04e-11 | 177 |
myeloid lineage restricted progenitor cell | 2.18e-10 | 66 |
granulocyte monocyte progenitor cell | 3.19e-10 | 67 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.48e-10 | 98 |
blood island | 1.48e-10 | 98 |
hemolymphoid system | 1.81e-09 | 108 |
bone marrow | 6.33e-09 | 76 |
bone element | 3.24e-08 | 82 |
skeletal element | 2.05e-07 | 90 |
immune system | 3.78e-07 | 93 |