FFCP PHASE1:Hg19::chr19:54640706..54640731,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:54640706..54640731,- | |||
|description=CAGE_peak_at_chr19:54640706..54640731,- | |description=CAGE_peak_at_chr19:54640706..54640731,- | ||
|id=chr19:54640706..54640731,- | |id=chr19:54640706..54640731,- | ||
|ontology_enrichment_celltype=CL:0000542!4.87e-11!53;CL:0000051!4.87e-11!53;CL:0000838!1.62e-10!52 | |ontology_enrichment_celltype=CL:0000542!4.87e-11!53;CL:0000051!4.87e-11!53;CL:0000838!1.62e-10!52 | ||
|ontology_enrichment_celltype_v019=CL:1001319;2.50e-10;1!CL:1000600;2.50e-10;1!CL:0000540;3.44e-07;6!CL:0000404;3.44e-07;6 | |ontology_enrichment_celltype_v019=CL:1001319;2.50e-10;1!CL:1000600;2.50e-10;1!CL:0000540;3.44e-07;6!CL:0000404;3.44e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:1001319,3.96e-10,1;CL:1000600,3.96e-10,1;CL:0000540,4.00e-07,6;CL:0000031,4.00e-07,6;CL:0000404,4.00e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;3.44e-07;6 | |ontology_enrichment_development_v019=CL:0000031;3.44e-07;6 | ||
|ontology_enrichment_disease=DOID:305!7.52e-18!106;DOID:162!1.90e-15!235;DOID:0050687!3.53e-15!143;DOID:14566!6.72e-15!239;DOID:0050686!1.46e-08!137 | |ontology_enrichment_disease=DOID:305!7.52e-18!106;DOID:162!1.90e-15!235;DOID:0050687!3.53e-15!143;DOID:14566!6.72e-15!239;DOID:0050686!1.46e-08!137 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.28e-10;4!DOID:1612;2.28e-10;4 | |ontology_enrichment_disease_v019=DOID:5093;2.28e-10;4!DOID:1612;2.28e-10;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,2.08e-10,4;DOID:1612,2.08e-10,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.50e-10;1!UBERON:0001256;2.50e-10;1!UBERON:0001259;2.50e-10;1 | |ontology_enrichment_uberon_v019=UBERON:0004645;2.50e-10;1!UBERON:0001256;2.50e-10;1!UBERON:0001259;2.50e-10;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,3.96e-10,1;UBERON:0001256,3.96e-10,1;UBERON:0001259,3.96e-10,1 | |||
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| ||
|short_description=p@chr19:54640706..54640731,- | |short_description=p@chr19:54640706..54640731,- | ||
}} | }} |
Latest revision as of 17:08, 27 July 2015
Short description: | p@chr19:54640706..54640731, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:54640706..54640731, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 3.96e-10 | 1 |
lower urinary tract cell | 3.96e-10 | 1 |
neuron | 4.00e-07 | 6 |
neuroblast | 4.00e-07 | 6 |
electrically signaling cell | 4.00e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 3.96e-10 | 1 |
wall of urinary bladder | 3.96e-10 | 1 |
mucosa of urinary bladder | 3.96e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.08e-10 | 4 |
breast cancer | 2.08e-10 | 4 |