FFCP PHASE1:Hg19::chr19:54545810..54545821,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:54545810..54545821,- | |||
|coexpression_cluster_id=C165 | |coexpression_cluster_id=C165 | ||
|description=CAGE_peak_at_chr19:54545810..54545821,- | |description=CAGE_peak_at_chr19:54545810..54545821,- | ||
|id=chr19:54545810..54545821,- | |id=chr19:54545810..54545821,- | ||
|ontology_enrichment_celltype=CL:0002573!2.57e-11!2 | |ontology_enrichment_celltype=CL:0002573!2.57e-11!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.60e-14;5 | |||
|ontology_enrichment_disease=DOID:6193!7.98e-10!1;DOID:3112!8.68e-10!1;DOID:0060085!1.21e-09!1;DOID:3165!1.21e-09!1;DOID:0060121!1.21e-09!1;DOID:2438!1.21e-09!1;DOID:4418!1.21e-09!1 | |ontology_enrichment_disease=DOID:6193!7.98e-10!1;DOID:3112!8.68e-10!1;DOID:0060085!1.21e-09!1;DOID:3165!1.21e-09!1;DOID:0060121!1.21e-09!1;DOID:2438!1.21e-09!1;DOID:4418!1.21e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:6193;1.23e-66;1!DOID:3112;2.39e-66;1!DOID:3350;3.61e-34;2!DOID:4468;7.05e-34;2!DOID:299;1.15e-11;25 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.23e-66,1;DOID:3112,2.39e-66,1;DOID:3350,3.61e-34,2;DOID:4468,7.05e-34,2;DOID:299,1.15e-11,25 | |||
|ontology_enrichment_uberon=UBERON:0002369!1.10e-11!3;UBERON:0001235!1.10e-11!3;UBERON:0006858!1.10e-11!3;UBERON:0002902!1.69e-09!1;UBERON:0009899!1.69e-09!1;UBERON:0003112!3.00e-09!1;UBERON:0000032!3.00e-09!1;UBERON:0005253!3.00e-09!1;UBERON:0003128!3.00e-09!1;UBERON:0002241!3.00e-09!1;UBERON:0001703!3.00e-09!1;UBERON:0004761!3.00e-09!1;UBERON:0009617!3.00e-09!1;UBERON:0002046!1.24e-07!5;UBERON:0004117!1.24e-07!5;UBERON:0007689!1.24e-07!5;UBERON:0007123!1.24e-07!5;UBERON:0003091!1.24e-07!5 | |ontology_enrichment_uberon=UBERON:0002369!1.10e-11!3;UBERON:0001235!1.10e-11!3;UBERON:0006858!1.10e-11!3;UBERON:0002902!1.69e-09!1;UBERON:0009899!1.69e-09!1;UBERON:0003112!3.00e-09!1;UBERON:0000032!3.00e-09!1;UBERON:0005253!3.00e-09!1;UBERON:0003128!3.00e-09!1;UBERON:0002241!3.00e-09!1;UBERON:0001703!3.00e-09!1;UBERON:0004761!3.00e-09!1;UBERON:0009617!3.00e-09!1;UBERON:0002046!1.24e-07!5;UBERON:0004117!1.24e-07!5;UBERON:0007689!1.24e-07!5;UBERON:0007123!1.24e-07!5;UBERON:0003091!1.24e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.60e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.60e-14,5;UBERON:0004117,1.60e-14,5;UBERON:0007689,1.60e-14,5;UBERON:0007123,1.60e-14,5;UBERON:0003091,1.60e-14,5;UBERON:0009722,2.47e-07,11;UBERON:0007690,2.47e-07,11 | |||
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|short_description=p@chr19:54545810..54545821,- | |short_description=p@chr19:54545810..54545821,- | ||
}} | }} |
Latest revision as of 17:07, 27 July 2015
Short description: | p@chr19:54545810..54545821, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:54545810..54545821, - |
Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.60e-14 | 5 |
pharyngeal pouch | 1.60e-14 | 5 |
thyroid diverticulum | 1.60e-14 | 5 |
pharyngeal pouch 2 | 1.60e-14 | 5 |
thyroid primordium | 1.60e-14 | 5 |
entire pharyngeal arch endoderm | 2.47e-07 | 11 |
early pharyngeal endoderm | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.23e-66 | 1 |
papillary adenocarcinoma | 2.39e-66 | 1 |
mesenchymal cell neoplasm | 3.61e-34 | 2 |
clear cell adenocarcinoma | 7.05e-34 | 2 |
adenocarcinoma | 1.15e-11 | 25 |