FFCP PHASE1:Hg19::chr19:50435797..50435818,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:50435797..50435818,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr19:50435797..50435818,- | |description=CAGE_peak_at_chr19:50435797..50435818,- | ||
|id=chr19:50435797..50435818,- | |id=chr19:50435797..50435818,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;7.60e-10;5!CL:0002178;6.88e-08;3!CL:0000182;2.09e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,6.00e-08,3;CL:0000182,2.13e-07,12;CL:0002616,8.67e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3193;4.71e-11;2!DOID:962;4.71e-11;2!DOID:171;1.66e-08;10!DOID:169;2.80e-08;6!DOID:1192;1.19e-07;3!DOID:12603;7.14e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,2.41e-11,2;DOID:962,2.41e-11,2;DOID:171,1.70e-08,10;DOID:169,3.03e-08,6;DOID:1192,7.65e-08,3;DOID:12603,7.35e-07,1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;7.60e-10;5!UBERON:0002410;7.60e-10;5!UBERON:0002107;8.81e-10;19!UBERON:0006925;8.81e-10;19!UBERON:0000010;2.74e-09;8!UBERON:0002423;2.80e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,8.35e-10,5;UBERON:0002410,8.35e-10,5;UBERON:0002107,8.36e-10,19;UBERON:0006925,8.36e-10,19;UBERON:0008836,8.36e-10,19;UBERON:0000010,2.63e-09,8;UBERON:0008835,2.22e-08,22;UBERON:0003894,2.22e-08,22;UBERON:0009854,5.49e-08,23;UBERON:0007499,2.70e-07,25;UBERON:0009497,2.70e-07,25;UBERON:0000015,2.70e-07,25;UBERON:0002423,2.70e-07,25;UBERON:0006235,2.70e-07,25;UBERON:0004161,2.70e-07,25;UBERON:0009856,5.45e-07,26 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.281908808191942,2.00146596706261,0,2.61701557230111,0,1.89515962028049,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0.229240217243854,0.492603536699674,0.550975469195755,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0.436194716338694,0,0,0,0,0,0.28769239232215,0.512321413058201,0,0,0,0,0,0.545812300115692,0,0.612167784741805,0.320929027076094,0,0,0.199463657621632,0,0.580418477257168,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,1.44575660953827,0,0.289693037921647,0,0,0.189069634328136,0,0.351339142772504,0.196468613246569,0,0,0,0,0.26591592103773,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.759783069987479,0.529636723252875,1.14734648299525,0.709336764396714,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,1.43723628363248,0.168336113954066,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0.389748020644795,0.252433774244115,0,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,6.33775174109154,3.9313088667105,8.27105869353966,0,0.122988438543114,0.343135620597051,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0.469634776943287,0.144366447761074,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,0,0,0.1466765716419,0,3.57656445851882,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.767309866440312,0.841980283299221,0.640695746278505,0.511707249066704,0.804269605718038,0,0.616838775210622,0.177561725313127,0.164254312027618,0.519254429183621,0.116210378459959,0.241718899183244,0,0,0.114814448164607,0,0.262248829918848,0,0,0,1.46139224653261,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.9273691048295,0.27470839445503,0.165018999841176,0,0,0,0.773365746336976,0,0.307007349452259,0,0.429680979473094,0.145016693914229,0.0852266274161009,1.06838442776085,0,0,0,0,1.39453664789186,0.31481234683064,0,1.23213432070436,0,0,0,0,0,0,0.38126038784765,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0.136499911407986,2.40389234321312,0,0.551365343546124,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0.354761064070598,0.844430541190656,0.987884678879706,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,3.15865397713722,0.721346064882224,1.35169502361987,0.159426272728822,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0.18714054040822,0,0.606802608747567,0,0,0,0,0,0,0.140669416410513,0,0.659215496907038,0.211125408127993,0,0,0.251932747854276,0.20453736500431,0.615424027305347,0.311039587661807,0.0898683511473268,0,2.04628948090749,0,0,0,0.969332746095218,0.278304294485554,0,0.260427761085233,0,0,0,0,0,2.06846023944879,0.874813840149763,0.347249989866585,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0.69169171316418,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0.067401132980677,0,0,1.27718352450966,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0.554698692052555,0.173559738335131,0.195984794828755,0,0.17472666824203,0,0.19351266257817,0.0730893170861856,0.246346371159628,0,1.3238419003725,0,0.274083849293502,0,0,0,0.0801588202515337,0,0,2.4495370916198,0.114536596165916,3.08870996151536,0,0.745515213392595,0,0,0,0,0.577901179803038,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0,1.37798474120648,1.6087933092499,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0.211200673038813,0,0.191915197319445,0,0,0,0.542999601753713,0,0.326587360109409,0,0.164185041498678,0,0.339936274560377,6.59485051551371,2.65013777824443,0,0,0.171086837884329,0.704815022316672,0.106787412567695,0,0.414239055347196,0,1.97611631897944,0,0,0,0,0,0,0.471162288750703,0,0,0.1251909307065,0,0,0.0620964029413835,0.830091809617385,0,0,0.856396000634902,0,0.468334905806882,0,0.298509605773748,0.467426619694449,0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| ||
|short_description=p@chr19:50435797..50435818,- | |short_description=p@chr19:50435797..50435818,- | ||
}} | }} |
Latest revision as of 16:19, 27 July 2015
Short description: | p@chr19:50435797..50435818, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:50435797..50435818, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 6.00e-08 | 3 |
hepatocyte | 2.13e-07 | 12 |
perirenal adipocyte cell | 8.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 8.35e-10 | 5 |
autonomic nervous system | 8.35e-10 | 5 |
liver | 8.36e-10 | 19 |
digestive gland | 8.36e-10 | 19 |
liver bud | 8.36e-10 | 19 |
peripheral nervous system | 2.63e-09 | 8 |
hepatic diverticulum | 2.22e-08 | 22 |
liver primordium | 2.22e-08 | 22 |
digestive tract diverticulum | 5.49e-08 | 23 |
epithelial sac | 2.70e-07 | 25 |
epithelium of foregut-midgut junction | 2.70e-07 | 25 |
anatomical boundary | 2.70e-07 | 25 |
hepatobiliary system | 2.70e-07 | 25 |
foregut-midgut junction | 2.70e-07 | 25 |
septum transversum | 2.70e-07 | 25 |
sac | 5.45e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 2.41e-11 | 2 |
neurofibroma | 2.41e-11 | 2 |
neuroectodermal tumor | 1.70e-08 | 10 |
neuroendocrine tumor | 3.03e-08 | 6 |
peripheral nervous system neoplasm | 7.65e-08 | 3 |
acute leukemia | 7.35e-07 | 1 |