FFCP PHASE1:Hg19::chr19:50434143..50434154,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=38bp_to_AB463397_5end | |association_with_transcript=38bp_to_AB463397_5end | ||
|cluster_id=chr19:50434143..50434154,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_AB463397_5end | |description=CAGE_peak_2_at_AB463397_5end | ||
|id=chr19:50434143..50434154,+ | |id=chr19:50434143..50434154,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000785;6.05e-13;1!CL:0002581;6.05e-13;1!CL:0000819;6.05e-13;1!CL:0000182;1.18e-09;12!CL:0002617;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,3.76e-13,1;CL:0000819,4.77e-13,1;CL:0000182,1.16e-09,12;CL:0002617,3.09e-07,2;CL:0000785,3.70e-07,2;CL:0000955,3.70e-07,2;CL:0000818,3.70e-07,2;CL:0000954,3.70e-07,2;CL:0000816,3.70e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000954;4.17e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;6.05e-13;1!DOID:8675;6.05e-13;1!DOID:3193;4.17e-07;2!DOID:962;4.17e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,4.77e-13,1;DOID:8675,4.77e-13,1;DOID:3193,4.42e-07,2;DOID:962,4.42e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.69e-16;19!UBERON:0006925;8.69e-16;19!UBERON:0002423;5.51e-12;25!UBERON:0002365;1.22e-09;31!UBERON:0002330;1.22e-09;31!UBERON:0002368;2.16e-08;33!UBERON:0003714;4.17e-07;2!UBERON:0005406;4.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.69e-16,19;UBERON:0006925,8.69e-16,19;UBERON:0008836,8.69e-16,19;UBERON:0008835,1.25e-13,22;UBERON:0003894,1.25e-13,22;UBERON:0009854,4.93e-13,23;UBERON:0007499,5.51e-12,25;UBERON:0009497,5.51e-12,25;UBERON:0000015,5.51e-12,25;UBERON:0002423,5.51e-12,25;UBERON:0006235,5.51e-12,25;UBERON:0004161,5.51e-12,25;UBERON:0009856,1.61e-11,26;UBERON:0002365,1.20e-09,31;UBERON:0002330,1.20e-09,31;UBERON:0002368,1.57e-08,35;UBERON:0005406,3.28e-07,2;UBERON:0003714,4.42e-07,2 | |||
|phase1_expression=0,1.49870366723688,0.563817616383885,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.534893840235659,0.57470412614962,0.472264687882075,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0.377875943688809,0.485168122375632,0.697287110717054,0.822335776043652,0,0.28769239232215,0.256160706529101,0,0,0,0,0.376484679085209,0.818718450173537,0,0,0.320929027076094,0.639337125799041,0,0,0,0.870627715885752,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0.522389211897802,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,1.06400514659507,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0,0,0.389748020644795,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0.738155454624648,0,0.4115740113314,0,6.33775174109154,5.89696330006576,7.68026878685825,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,2.10833939483032,0.239624855491583,1.14861935834114,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0.640695746278505,0,0.64341568457443,1.48418066444991,0,0.710246901252508,0.164254312027618,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,1.39453664789186,0.62962469366128,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0,0.707027159768564,0,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.564862804660675,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0.640276590135727,0,0,0,0.846694330895531,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0.755798243562828,0,0.246169610922139,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,1.02193298195737,0,0.166211681900156,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,1.27718352450966,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0.0870592065804026,0.34945333648406,0.343972064943233,0.0967563312890851,0.0730893170861856,0,0,0.706049013532002,0,0,0.19871461170299,0,0,0,0,0,0.432271251462318,0.114536596165916,1.20116498503375,0,0.248505071130865,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0.492137407573744,0.592713324460491,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0,0,0,0,0,0,4.68967147769864,5.30027555648885,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0.157054096250234,0,0,0.1251909307065,0,0,0.0620964029413835,0.691743174681154,0,0,0,0.235265819698172,0.468334905806882,0,0.298509605773748,0.233713309847224,0,0,0,0,0.915360273587694,0.151230923763239,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0.761610424337591,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0.521988583930423,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.398594520940089,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0,0,0,0.511577485214607,0,0.471797825567689,0,0.33946505990805,0,1.11542187833102,1.11728983594649,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0.23248285073625,0.347716544605159,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.799529247399431,0.178553938605658,0,0,0,0,0.143339583151451,0.157771562193185,0,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0,0.534434810531121,0.18378979906969,0,0.151557396436479,0,0,0.103432995861895,0,0.23806443146374,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0.961705476909699 | |phase1_expression=0,1.49870366723688,0.563817616383885,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.534893840235659,0.57470412614962,0.472264687882075,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0.377875943688809,0.485168122375632,0.697287110717054,0.822335776043652,0,0.28769239232215,0.256160706529101,0,0,0,0,0.376484679085209,0.818718450173537,0,0,0.320929027076094,0.639337125799041,0,0,0,0.870627715885752,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0.522389211897802,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,1.06400514659507,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0,0,0.389748020644795,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0.738155454624648,0,0.4115740113314,0,6.33775174109154,5.89696330006576,7.68026878685825,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,2.10833939483032,0.239624855491583,1.14861935834114,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0.640695746278505,0,0.64341568457443,1.48418066444991,0,0.710246901252508,0.164254312027618,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,1.39453664789186,0.62962469366128,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0,0.707027159768564,0,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.564862804660675,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0.640276590135727,0,0,0,0.846694330895531,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0.755798243562828,0,0.246169610922139,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,1.02193298195737,0,0.166211681900156,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,1.27718352450966,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0.0870592065804026,0.34945333648406,0.343972064943233,0.0967563312890851,0.0730893170861856,0,0,0.706049013532002,0,0,0.19871461170299,0,0,0,0,0,0.432271251462318,0.114536596165916,1.20116498503375,0,0.248505071130865,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0.492137407573744,0.592713324460491,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0,0,0,0,0,0,4.68967147769864,5.30027555648885,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0.157054096250234,0,0,0.1251909307065,0,0,0.0620964029413835,0.691743174681154,0,0,0,0.235265819698172,0.468334905806882,0,0.298509605773748,0.233713309847224,0,0,0,0,0.915360273587694,0.151230923763239,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0.761610424337591,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0.521988583930423,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.398594520940089,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0,0,0,0.511577485214607,0,0.471797825567689,0,0.33946505990805,0,1.11542187833102,1.11728983594649,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0.23248285073625,0.347716544605159,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.799529247399431,0.178553938605658,0,0,0,0,0.143339583151451,0.157771562193185,0,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0,0.534434810531121,0.18378979906969,0,0.151557396436479,0,0,0.103432995861895,0,0.23806443146374,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0.961705476909699 | ||
|short_description=p2@AB463397 | |short_description=p2@AB463397 | ||
}} | }} |
Latest revision as of 16:18, 27 July 2015
Short description: | p2@AB463397 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AB463397_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 38bp_to_AB463397_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 3.76e-13 | 1 |
B-1 B cell | 4.77e-13 | 1 |
hepatocyte | 1.16e-09 | 12 |
adipocyte of breast | 3.09e-07 | 2 |
mature B cell | 3.70e-07 | 2 |
pre-B-II cell | 3.70e-07 | 2 |
transitional stage B cell | 3.70e-07 | 2 |
small pre-B-II cell | 3.70e-07 | 2 |
immature B cell | 3.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 8.69e-16 | 19 |
digestive gland | 8.69e-16 | 19 |
liver bud | 8.69e-16 | 19 |
hepatic diverticulum | 1.25e-13 | 22 |
liver primordium | 1.25e-13 | 22 |
digestive tract diverticulum | 4.93e-13 | 23 |
epithelial sac | 5.51e-12 | 25 |
epithelium of foregut-midgut junction | 5.51e-12 | 25 |
anatomical boundary | 5.51e-12 | 25 |
hepatobiliary system | 5.51e-12 | 25 |
foregut-midgut junction | 5.51e-12 | 25 |
septum transversum | 5.51e-12 | 25 |
sac | 1.61e-11 | 26 |
exocrine gland | 1.20e-09 | 31 |
exocrine system | 1.20e-09 | 31 |
endocrine gland | 1.57e-08 | 35 |
perirenal fat | 3.28e-07 | 2 |
neural tissue | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 4.77e-13 | 1 |
lymphosarcoma | 4.77e-13 | 1 |
peripheral nerve sheath neoplasm | 4.42e-07 | 2 |
neurofibroma | 4.42e-07 | 2 |